Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00793 ATGGCATCACTGGTTGTCAGTGGTAACAGTCAAATGTCTTCTTCGGTTTCTGTTCAAGAAAAAGGAAGTAGAAATAAGAGAAAATTCAGGGCTGATCCACCTTTAGGGGAATCAAGTAAGAGTATATCTTCACTTCAACATGAGAGCCTAAGTTATGAATTTTCTGCTGAAAAAGTCGAAATTACCCCATGTTTTGGGCAAGTCACAGCTTCTGACTTGTGCAGTGTTAGCCACGGTTGTTCTGATGGCTTGAAGCTTGACCTTGGATTATCTAGCCCTGCAGTTTCATCTGAGGTTAGGCTTAGCCAGCCTAAGGAGGAATTAGAAGTGGTTGAGTCCCATGGCGCTGATTGGAGTGATCACACAGAAACTCAGTTGCAAGAACTTGTCTTGAGCAATTTGCAAACCATTTTCAAGAGTGCAATAAAAAAAATTGTTGCTTGTGGCTACACTGAAGATGTTGCTACAAAGGCTATGTTAAGACCTGGCATCTGTTATGGATGCAAAGACACTGTGTCTAATATAGTTGACAACACTTTAGCTTTTTTGAGAAACGGTCAAGAGTTTGATCCTTCACGAGAGCACTATTTTAAAGATTTAGCCGAGCTTCAGAATTACATCTTGGCCGAATTGGTTTGCGTTCTTCAAGAGGTTAGGCCATTTTTCAGTTTCGGAGATGCAATGTGGTGTTTGTTAATCAGTGACATGAATGTGTCACATGCTTGTGCAATGGATGGTGACCCTTTAAGTAGTTTATGCAGCGATGGCATTGGTGATGGCTCTTCTTCTGTCCAGACTGAATCACAATCAAAAGCTGAAACAAAAAGTTCGGAATTGAGTCTTCCAAGTCCTTGTAATTCAATTCCCCCGGGCACTCAATCTGAGAAATCCGTTGTGGCAGAAAATTCTCAAATTCGCGGTGGACTCTTGGAAAAACAGGGTGCTAATTCTGGATGTCATCCTGTTGACAAGTCATCTAGTGCTTCTGGAACCTCTCAACCTCCCCTGCTACACGAAAAATGTGGGATTGTTAGAAAGGTCCATTCGAGTAGCACCAAGAGGGAGTACATTTTTCGTCAGAAGTCAATCCATGTGGAAAAAAGTTATCGGACATACGGGTCTAAAGGGTCTTCAAGAGGAGGAAAGCTGAGTGGTTTGAGTGGTTTAATCTTGGATAAAAAACTTAAATCAGTATCAGAATCTACTGCCATAAACTTAAAGAGTGCTTCTATAAACATAAGCAAGGCAGTGGGAATTGATGTCACTCAAAACAATCATAACACCAATTTCTCATCTAATAATGGACCATCTACCCCTACATTTAGCGTGGATTCTAGTGATACTATTTCTCGTGCAGCTGATTCTTCATCTTCAGAGCATGAAGCAAATCCTATACCAGCAGTCAGTAGTCCCCCAGATGCATTATCAGCTACAGACACTGACCTTTCTCTTTCATTGTCTTCAAAAGGCAATTCTTCTATATCCCCTATCTGCTGTAGTAACAAGTCACATAGTAGTAGTTGTGTGGGGATACCATATGACAAGTCCATGAGACAATGGTTGCCCCAAGATAGAAAAGATGAGCTGATTTTGAAGATGGTTCCGAGGGTTCGGGAGCTGCAAAATGAACTTCAAGAATGGACAGAGTGGGCAAATCAAAAGGTGATGCAGGCTGCTCGTCGGCTGAGTAAGGACAAGGCTGAGCTTAAGACACTAAGGCAAGAGAAAGAAGAAGTTGAACGACTTAAGAAGGAGAAACAATGCCTTGAAGAAAACACCATGAAAAAGCTTTCTGAGATGGAAAATGCCTTGGGTAAAGCAGGTGGACAAGTGGAACGAGCTAATACTGCAGTACGGAAGCTCGAGATGGAGAATGCTGCATTGAGGAAAGAGATGGAGGCTGCTAAGTTACGTGCGGCAGAATCAGCAACAAACTTTCAAGAGGTCTCTAAGAGGGAAAAGAAGACCCAAATGAAGTTTCATTCATGGGAGAATCAGAAATCGTTGTTACAGGAAGAGCTAATGACTGAAAAAAACAAATTGGCACAGATATCGAAGGAATCAAAGCAAGCCGAAGTGCAAGCGGAGCAATTCGAGGCTAAACGGCGGCAGGCAGCATTGAAAACAGAAGAACTTCTCTCCATGGTCAGTTCTATACGAAAAGAAAGAGAACAAATCGAGGAGTCGGCTAGAACCAAGGAGGAGAGGATCAAATTGGAAGCGGAGAAGGAGCTGCGAAGATACAAAGATGACATCCAGAAACTTGAAAAAGAAATTGCACAAATAAGACAGAAGTCCGACTCTTCAAAAATTGCAGCACTAAAAAGAGGAATCGATGGAAGCTATGCCGGTAGCTTCAAGGACACGAAAAAGGGTTCTGGTTTTGATGAACCCCACACCGCGTCTATTTCAGAACTGGTTCAAAAGTTAAATAACTTCTCTATGAATGGAGGAGGTGTGAAACGGGAAAGGGAGTGCGTGATGTGCCTTTCGGAAGAGATGTCTGTTGTATTTCTTCCATGTGCTCATCAAGTTGTTTGCACAAAGTGCAATGAGCTCCATGAGAAGCAGGGAATGCAAGATTGTCCTTCTTGCAGGAGCCCCATCCAAGAGCGGATTTCTGTGCGTTATGCGCGTACATAA 2643 0.426 MASLVVSGNSQMSSSVSVQEKGSRNKRKFRADPPLGESSKSISSLQHESLSYEFSAEKVEITPCFGQVTASDLCSVSHGCSDGLKLDLGLSSPAVSSEVRLSQPKEELEVVESHGADWSDHTETQLQELVLSNLQTIFKSAIKKIVACGYTEDVATKAMLRPGICYGCKDTVSNIVDNTLAFLRNGQEFDPSREHYFKDLAELQNYILAELVCVLQEVRPFFSFGDAMWCLLISDMNVSHACAMDGDPLSSLCSDGIGDGSSSVQTESQSKAETKSSELSLPSPCNSIPPGTQSEKSVVAENSQIRGGLLEKQGANSGCHPVDKSSSASGTSQPPLLHEKCGIVRKVHSSSTKREYIFRQKSIHVEKSYRTYGSKGSSRGGKLSGLSGLILDKKLKSVSESTAINLKSASINISKAVGIDVTQNNHNTNFSSNNGPSTPTFSVDSSDTISRAADSSSSEHEANPIPAVSSPPDALSATDTDLSLSLSSKGNSSISPICCSNKSHSSSCVGIPYDKSMRQWLPQDRKDELILKMVPRVRELQNELQEWTEWANQKVMQAARRLSKDKAELKTLRQEKEEVERLKKEKQCLEENTMKKLSEMENALGKAGGQVERANTAVRKLEMENAALRKEMEAAKLRAAESATNFQEVSKREKKTQMKFHSWENQKSLLQEELMTEKNKLAQISKESKQAEVQAEQFEAKRRQAALKTEELLSMVSSIRKEREQIEESARTKEERIKLEAEKELRRYKDDIQKLEKEIAQIRQKSDSSKIAALKRGIDGSYAGSFKDTKKGSGFDEPHTASISELVQKLNNFSMNGGGVKRERECVMCLSEEMSVVFLPCAHQVVCTKCNELHEKQGMQDCPSCRSPIQERISVRYART 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00793 880 MobiDBLite consensus disorder prediction 1 42 - -
Mepo6g00793 880 Pfam Zinc finger, C3HC4 type (RING finger) 823 871 - -
Mepo6g00793 880 PANTHER OS05G0141500 PROTEIN 11 875 IPR046934 -
Mepo6g00793 880 MobiDBLite consensus disorder prediction 1 20 - -
Mepo6g00793 880 Coils Coil 611 645 - -
Mepo6g00793 880 Coils Coil 555 599 - -
Mepo6g00793 880 Pfam Family of unknown function (DUF6592) 133 244 IPR046527 -
Mepo6g00793 880 Coils Coil 667 708 - -
Mepo6g00793 880 MobiDBLite consensus disorder prediction 427 464 - -
Mepo6g00793 880 MobiDBLite consensus disorder prediction 319 334 - -
Mepo6g00793 880 MobiDBLite consensus disorder prediction 260 301 - -
Mepo6g00793 880 ProSiteProfiles Zinc finger RING-type profile. 826 866 IPR001841 -
Mepo6g00793 880 CDD RING-HC_MIP1-like 821 875 - -
Mepo6g00793 880 Coils Coil 716 772 - -
Mepo6g00793 880 SUPERFAMILY RING/U-box 807 873 - -
Mepo6g00793 880 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 805 876 IPR013083 -
Mepo6g00793 880 MobiDBLite consensus disorder prediction 427 481 - -
Mepo6g00793 880 MobiDBLite consensus disorder prediction 260 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00793 Mepo-Chr6 8154257 8158708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00793 826 875 C3H Transcription Factor Family AT1G73950 44.000 7.37e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00793 - - gmx:100777140 1167.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00793 6 8154257 8158708 Mepo6g00793 6 8154257 8158708 ECH