Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00787 ATGAATGTACCATATATGTTATTAGACTTGTCAGTTTTGGAGATTGAGGACGGAGACCTATCCGAGTATTCACCTAGAAGTCAAGAATCTGATACACCAAGTTCAAGGGCAAGCACTTCTGATTCTGAAGGAGGTACACGACAGTGGCGAGGTTTCTTTAAATTAATCAAAAAGGGATCACAAATGCCATTTCATCACCTTCATCCACTGAAGAATGTTCCAAAACTTACTAGAAGAAAAAGCAAAAGAATTAGGGAGGATTTCATTCCATCTCTCAATTCTCCAGCTCTTCAGTCTTCTTTTGATTCTGAGTTTATGTGTTTCAAATCTTCATGGAAAAATTTCACTCTCGCAGAAATTCAAGCTGCAACCAATGACTTTAGCCAAGATAATTTGATTGGGGAGGGAGGCTATGCTGAGGTTTACTTAGGAAAACTGGATGATGGAAACTTTGTTGCCATTAAAAGGTTGACAAGAGGTTCCCAAGAAGAAATGACTGCAGATTTTTTGTCTGAGCTTGGCATTATAGTGCATGTGGATCACCCCAATATTGCTAGATTGATTGGATATGGTGTTGAAGGTGGAATGTTTCTTGTTCTTCAATTGTCTCCTCATGGAAGCTTGTCATCCTTACTCTATGGACCTAGAGAGAAACTGAATTGGAGCCTTAGATATAAGATTACTTTGGGGACTGCTGAGGGTCTTCGCTATCTGCACGAGGGATGTCAAAGAAGGATTATTCACAAAGATATCAAAGCTTCTAATATACTTCTCTCAGAGGACTTTGAGCCTCAGATATCTGATTTTGGGCTTGCAAAGTGGTTACCTGATCAATGGACTCACCATACTGTCTCCAAAGTGGAAGGCACATTTGGCTATCTTCCTCCCGAATTCTTCATGCATGGTATAGTAGATGAAAAAACTGATGTATATGCTTATGGTGTACTATTATTGGAGCTCATTACTGGGAGACAAGCTTTGGATAGTTCACAAAAAAGTCTGGTGATGTGGGCAAAACCTTTGCTAACTAGTAATAACATCAAAGAGCTAGTTGATCCAGTTTTGGGTGATGCTTATGACGCAGAACAGATGAAACTTATAATATTAACTGCTTCTATGTGTATAGATCAGTCCTCAATACAGCGACCGCATATGAGTCAGGTGTTACAGATACTAAGAGGTGAAGAAGAGAGTTTGAGAATGTTGAAAGAGAGGCAGAAGTCGAAACTTCATAGGACATACTCAGAAGAACTATATGCTGCAGAAGATTACAACTCAACAAAGTTTTTGAGCGATAGGGATCGATATATGGAGACGATTTTAGGCCCCAGCAATCCAAATTAA 1344 0.3936 MNVPYMLLDLSVLEIEDGDLSEYSPRSQESDTPSSRASTSDSEGGTRQWRGFFKLIKKGSQMPFHHLHPLKNVPKLTRRKSKRIREDFIPSLNSPALQSSFDSEFMCFKSSWKNFTLAEIQAATNDFSQDNLIGEGGYAEVYLGKLDDGNFVAIKRLTRGSQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLSSLLYGPREKLNWSLRYKITLGTAEGLRYLHEGCQRRIIHKDIKASNILLSEDFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPLLTSNNIKELVDPVLGDAYDAEQMKLIILTASMCIDQSSIQRPHMSQVLQILRGEEESLRMLKERQKSKLHRTYSEELYAAEDYNSTKFLSDRDRYMETILGPSNPN 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00787 447 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 97 201 - -
Mepo6g00787 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Mepo6g00787 447 MobiDBLite consensus disorder prediction 25 46 - -
Mepo6g00787 447 SUPERFAMILY Protein kinase-like (PK-like) 106 392 IPR011009 -
Mepo6g00787 447 SMART serkin_6 127 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00787 447 PANTHER OS08G0249100 PROTEIN 28 426 IPR046958 -
Mepo6g00787 447 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 204 406 - -
Mepo6g00787 447 MobiDBLite consensus disorder prediction 21 46 - -
Mepo6g00787 447 Gene3D Phosphorylase Kinase; domain 1 91 201 - -
Mepo6g00787 447 ProSitePatterns Protein kinases ATP-binding region signature. 133 155 IPR017441 GO:0005524
Mepo6g00787 447 ProSiteProfiles Protein kinase domain profile. 127 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00787 447 Gene3D Transferase(Phosphotransferase) domain 1 204 419 - -
Mepo6g00787 447 Pfam Protein tyrosine and serine/threonine kinase 130 390 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00787 Mepo-Chr6 8110085 8113465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00787 98 428 Receptor kinase-like Gene Family AT1G53420 38.938 9.34e-74 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mepo6g00787 PK_Tyr_Ser-Thr 1.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00787 - - lja:Lj6g3v1915960.1 781.941