Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00778 ATGCAACGCTTCTCCGCGCACCGCTTACGTTACGCTTTCCATCTCCGACACTTCTCAGCTGGGAACGTAGCGCGCGCTACGGCGGCAACAATCGACGAGGAGCCATGGTGGAAGGAGTCGATCGAAAAGGCTCGCAACATTGGAATCTCAGCGCACATTGATTCCGGGAAGACGACGTTGACGGAGCGGATTCTGTTCTACACTGGTATGATCTACCAGATGCATGAGGTTCGTTCGAAAGATGTCATGGGTCCTAAGATGGATAGAGATCCCTTAGATGTTGGTGGTGTACAATGTCAGTCCATTACCGTTGATCGCCAAATGAGACGGTATCAGGTTCCAAGAATTGCATTTATCAACAAGCTTGATCGACCGGAAGCGAATCCGTGGAAAGTTATAAATCAGGCTAGGTCTAAGCTTAAGCATCATTGTGCTGCACTTCAAGTTCCAATAGGTTTGGAAAGTGATTTTAAGGGAGTTGTTGATCTTGTGAAGTTAAAGGCCTATCGTTTTGATGGTGAATATGGCCAAGATGTTGTTGTTGGAGAAGTGCCTGCAGATATGGAAGCTTTGGTAGCAGAGAAAAGACGTGAACTCATAGAAACTGTGTCAGAGGTTGATGATGTACTTGCCGAAGCGTTTCTTAGTGATGATGAGACCATTTCAGATGCTGAACTTGAGGGAGCAATTCGTAGGGCTACCATAGCCCGGAAATTTATACCGGTATTCATGGGTAGTGCTGTCAAAAACACGGGGGTACAACCACTTCTGGATGGTGTAGTTAGTTATTTGCCTTGTCCGATTGAAGTTAGTAATTATGCTCTTGACCTATCTAAGAATGAGGAGAAGGTTAAGCTCACTGGAAGTCCCGATGGGCCCCTTGTAGCATTGGCTTTCAAGTTGGAGCAAAAGGACTTTGGTCAGTTAACATATCTAAGAGTTTATGAGGGCGTCATTCGGAAGGGTGATTTTATTGTTAATGTTAACACTGGAAAGAAAATTAAGGTTCCTCGCTTAGTTCAGATGCATTCTAATGAGATGAATGACATTCAAGAGGCCCATGCTGGCCAAATAGTTGCTGTATTTGGTGTTGATTGTGCATCCGGCGATACTTTTACCGATGGGTCGGTTAAATACACAATGACTTCTATGAATGTTCCTGAGCCCGTGATGTCATTAGCTGTACAGCCAGTCTCAAAAGATTCTGGAGTGAAATTTTCAAAAGCTTTGAGCCGCTTCCAAAGAGAGGATCCTACTTTCCGTGTTAGCTTGGAGCCAGAGAGTGGGCAGACAATCATTTCTGGAATGGGAGAACTACACTTAGATATTTATGTTAAACGCATTAAGATGGAGTACGGGGTTGATGCTTCAGTTGGAAAGCCCCAGGTAAACTTCAGAGAAACTGTTACTCAGCGTGCTGATTTTGATTATTTGCATAAGAAGCAATCCGGAGGGCAAGGACAATATGGACGAGTGATTGGATATATTGAACCACTTCCTGCTGGGTCAGGAACTAAGTTTGAATTTGAAAACATGCTTGTTGGTCAAGCTATTCCATCGAATTTTTTCCCTGCAATTGAGAAGGGTTTTAAAGAAGCTGTCAACTCTGGTGCCTTGATTGGACATCCAGTTGAAAATCTCCGAGTTGTCTTGACAGATGGTGCTGCTCATGATGTTGATTCCAGTGAACTTGCCTTTAAGTTGGCTTCTATCTATGCTTTTAGAGAGTGTTATGCAGCTTCCAGACCAGTTATATTAGAACCTGTTATGCTTGTTGAACTGAAAGTACCAACAGAATTTCAGGGAGCTGTTGCTGGTGACCTCAACAAGAGAAAAGGTGTGATTGTTGGGAATGATCAAGACGAAGATGATTCTGTCATTACAGCTTATGTGCCTCTTAACAATATGTTTGGGTATTCTACGGCTATTCGTTCGATGACACAGGGAAAGGGTGAATTCACAATGGAATATAAGGAACATTCACGTGTTTCTCATGATGTACAGACCCGATTGATAAACACATACAAGGGCAATAAGGCAGCTGAATGA 2049 0.4348 MQRFSAHRLRYAFHLRHFSAGNVARATAATIDEEPWWKESIEKARNIGISAHIDSGKTTLTERILFYTGMIYQMHEVRSKDVMGPKMDRDPLDVGGVQCQSITVDRQMRRYQVPRIAFINKLDRPEANPWKVINQARSKLKHHCAALQVPIGLESDFKGVVDLVKLKAYRFDGEYGQDVVVGEVPADMEALVAEKRRELIETVSEVDDVLAEAFLSDDETISDAELEGAIRRATIARKFIPVFMGSAVKNTGVQPLLDGVVSYLPCPIEVSNYALDLSKNEEKVKLTGSPDGPLVALAFKLEQKDFGQLTYLRVYEGVIRKGDFIVNVNTGKKIKVPRLVQMHSNEMNDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKDSGVKFSKALSRFQREDPTFRVSLEPESGQTIISGMGELHLDIYVKRIKMEYGVDASVGKPQVNFRETVTQRADFDYLHKKQSGGQGQYGRVIGYIEPLPAGSGTKFEFENMLVGQAIPSNFFPAIEKGFKEAVNSGALIGHPVENLRVVLTDGAAHDVDSSELAFKLASIYAFRECYAASRPVILEPVMLVELKVPTEFQGAVAGDLNKRKGVIVGNDQDEDDSVITAYVPLNNMFGYSTAIRSMTQGKGEFTMEYKEHSRVSHDVQTRLINTYKGNKAAE 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00778 682 FunFam Elongation factor G 467 603 - -
Mepo6g00778 682 NCBIfam elongation factor G 94 676 IPR004540 GO:0003746|GO:0005525|GO:0006414
Mepo6g00778 682 SMART EFG_C_a 584 671 IPR000640 -
Mepo6g00778 682 Hamap Elongation factor G [fusA]. 40 675 IPR004540 GO:0003746|GO:0005525|GO:0006414
Mepo6g00778 682 Pfam Elongation factor Tu GTP binding domain 43 83 IPR000795 GO:0003924|GO:0005525
Mepo6g00778 682 Pfam Elongation factor Tu GTP binding domain 95 265 IPR000795 GO:0003924|GO:0005525
Mepo6g00778 682 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 265 IPR027417 -
Mepo6g00778 682 FunFam Elongation factor G, mitochondrial 276 389 - -
Mepo6g00778 682 Gene3D - 467 672 IPR014721 -
Mepo6g00778 682 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 30 89 - -
Mepo6g00778 682 Pfam Elongation factor Tu domain 2 307 373 IPR004161 GO:0005525
Mepo6g00778 682 SUPERFAMILY Translation proteins 232 384 IPR009000 -
Mepo6g00778 682 SUPERFAMILY Ribosomal protein S5 domain 2-like 461 583 IPR020568 -
Mepo6g00778 682 Pfam Elongation factor G, domain IV 461 581 IPR005517 GO:0005525
Mepo6g00778 682 CDD EFG_III 387 462 IPR009022 -
Mepo6g00778 682 Gene3D - 588 658 - -
Mepo6g00778 682 CDD EFG_mtEFG1_IV 465 580 IPR005517 GO:0005525
Mepo6g00778 682 SMART EFG_IV_2 462 582 IPR005517 GO:0005525
Mepo6g00778 682 Pfam Elongation Factor G, domain III 386 460 IPR041095 -
Mepo6g00778 682 Gene3D - 52 80 IPR027417 -
Mepo6g00778 682 CDD mtEFG1_II_like 294 374 - -
Mepo6g00778 682 SUPERFAMILY EF-G C-terminal domain-like 384 462 IPR035647 -
Mepo6g00778 682 Gene3D - 93 271 IPR027417 -
Mepo6g00778 682 CDD mtEFG1_C 587 664 IPR035649 -
Mepo6g00778 682 Gene3D Translation factors 275 392 - -
Mepo6g00778 682 Gene3D Elongation Factor G (Translational Gtpase), domain 3 393 466 - -
Mepo6g00778 682 SUPERFAMILY EF-G C-terminal domain-like 587 676 IPR035647 -
Mepo6g00778 682 Pfam Elongation factor G C-terminus 585 670 IPR000640 -
Mepo6g00778 682 FunFam Elongation factor G 390 466 - -
Mepo6g00778 682 FunFam Elongation factor G 588 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00778 Mepo-Chr6 8037235 8039715 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00778 256 651 Eukaryotic Initiation Factors Gene Family AT1G56070 24.153 3.56e-17 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00778 K02355 - gmx:100783315 1109.36