Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00776 ATGGAATCCAAATCTCAATCAATTCTCCCTCCAATGGATCCTCCCGAAGATCTCTCCTCCGTTTGGGACCTCTCTTACCTCCTCGACTTCGACGATGATATTCCACAGCTCCCTCCTCTTCCAAACCCTAACCCTAACCCAGACGAAAACGACAGGATCAGAAAGCGTGACCCGAGGTTAACTTGCTCCAACTTTCTCGCGGGTCAAGTACCATGTGCATGTCCCGAACTCGATGCTTTGTTAGAAGATAACGGTTTACCAGGGAAGAAACGAGCACGAACTGCACGCGCGGCTGTATCAGCGCGTTGTCAGGTTCCTGGTTGTGAAGTTGATATTTCTGAGCTTAAAGGCTATCATAGACGGCATAGGGTTTGTTTGCGGTGTGCTAATGCTGCTACTGTTGTTCTTGATGGTGATGTGAAGAGATACTGTCAACAGTGTGGGAAGTTTCATGTTTTATCGGATTTCGATGAAGGGAAACGGAGTTGTAGAAGGAAATTGGAGCGGCATAATACTAGGAGGAGGAGAAAGGCTGTAGATTCTGCAGTAGGAGTTGATAGTGAAGTTCAAACTGTTACTCAAAATGATGATTCCAATTGTGATGGAGAACTAGGAATAGATTATTCGAATTTGAGTAGTGAGAATATTGAAAAAAGAGTGTCACTGGATCATGAAGAAGAACCAGTTGTTAATGTTTCGTCAACTCCAGAGACCCAGACTATTAATGGTGATAGTGTCGTGTCCTTTGTTGCTTCTGCTGATACACAAGCGAATATTGGAAAAGATGTTTCTGATCTTTCTAAGTCGCCTTCATATTGTGACAATAAGAGTGATTATTCGTCTATGTGCCAAACAGGCCGGGTTTCTTTTAAGCTTTACGACTGGAATCCTGCGGAATTTCCGAGAAGACTGCGGCTCCAAATATTCCAATGGTTGGCAAGTATGCCTGTAGAGCTGGAGGGATATATCCGCCCTGGGTGTACTATCCTGACGATTTTTATTGCAATGCCAAATATTATGTGGATAAATTTACTCAAAGACCCTATGTATTATGTGCGTGATCTTGTTGCTCCCAGAAATATGCTATCTGGAAGAGGAACCGCTCTAATTCATCTGAATGATATGATCTTCCGTGTAATGAAAGATGGAATTTCTGTGACAAAAGTCGAGGTAAACATGCAGGCACCTAGGCTTCATTATATTCATCCCACATGCTTTGAAGCAGGAAAACCCATGGAATTTTTCGCCTGTGGAAATAACTTGCTGCAGCCTAAGTTTCGGCTTCTTGTATCATTTTATGGAAAGTATCTGAAGTGTGAGTATTGCGTTCCGTCTCCACATAACTCGGCTGAAGACAATATTTCTTGTGCTTTTGATAATCAGTTATATAAGATATGTGTCCCTCATATTGAGGAAAACCTCCTGGGGCCTGCATTTATTGAGGTTGAGAATGAGTCTGGTTTATCAAACTTTATTCCTGTACTTATTGGGGATAAAGAAATTTGCACTGAAATGAAGATATTGCAACAAAAACTAGACGCTTCTCTCCTTTCTAAACAATTTCGGTCTGCATCTGGTAGTTCTATTTGTAGCTCATGTGAAGCTTTTGTACATATTCACACATCATCATCAGACTTGCTTGTAGATATAGCATGGTTACTTAAAGACCCTACTTCAGAAATTTTTGACAGAATGGTATCTGCTTCACAGATTCAAAGATATTGCTATTTGTTGGATTTTCTAATATGCAATGATTCAACTATCATCTTGGGAAAAATATTGCCAAATTTGATAAGCATAACAAAAAGCATGAAATCCAATATAAGTGATATTGACATGGACCAACTGCTGAAGGGAATGTGTAATGCTAGAGATGCTATTTGTCGGAAAGGTGGAGGTATAGTTTTGAACTCCAAAATGGAAGGCTTCAAACCTGCTCAGTGCAGTTCCCAAAATGCCAAGCCATCAGTTGTTGAAGTTAACAGTCAGGGTATCCAGTTTAGAGCAGATGCAGAGTTGGGAGTTCTGAGCAGTCTCGCTTCTGATGAAAAAAATCAGAAGATACCGCTTTTGAAAAGGGAAATTATAATGAATATGGAAGAGTTGCCTAAAAGATGTGACCATCGAAATCTTACCCGGGGATTCTTGAGATCTCGACCAACTACTTTTGTACTTGTATCACTTGTTGTTTGTCTTGCGGTATGTGTATCCGTCTTTCATCATGGGAGGGTTAACGAATTGGCAGTATCCATTAGAAGGTGTTTGTTCAACCATTGA 2277 0.4084 MESKSQSILPPMDPPEDLSSVWDLSYLLDFDDDIPQLPPLPNPNPNPDENDRIRKRDPRLTCSNFLAGQVPCACPELDALLEDNGLPGKKRARTARAAVSARCQVPGCEVDISELKGYHRRHRVCLRCANAATVVLDGDVKRYCQQCGKFHVLSDFDEGKRSCRRKLERHNTRRRRKAVDSAVGVDSEVQTVTQNDDSNCDGELGIDYSNLSSENIEKRVSLDHEEEPVVNVSSTPETQTINGDSVVSFVASADTQANIGKDVSDLSKSPSYCDNKSDYSSMCQTGRVSFKLYDWNPAEFPRRLRLQIFQWLASMPVELEGYIRPGCTILTIFIAMPNIMWINLLKDPMYYVRDLVAPRNMLSGRGTALIHLNDMIFRVMKDGISVTKVEVNMQAPRLHYIHPTCFEAGKPMEFFACGNNLLQPKFRLLVSFYGKYLKCEYCVPSPHNSAEDNISCAFDNQLYKICVPHIEENLLGPAFIEVENESGLSNFIPVLIGDKEICTEMKILQQKLDASLLSKQFRSASGSSICSSCEAFVHIHTSSSDLLVDIAWLLKDPTSEIFDRMVSASQIQRYCYLLDFLICNDSTIILGKILPNLISITKSMKSNISDIDMDQLLKGMCNARDAICRKGGGIVLNSKMEGFKPAQCSSQNAKPSVVEVNSQGIQFRADAELGVLSSLASDEKNQKIPLLKREIIMNMEELPKRCDHRNLTRGFLRSRPTTFVLVSLVVCLAVCVSVFHHGRVNELAVSIRRCLFNH 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00776 758 MobiDBLite consensus disorder prediction 33 54 - -
Mepo6g00776 758 Gene3D - 99 164 IPR036893 GO:0003677|GO:0005634
Mepo6g00776 758 ProSiteProfiles Zinc finger SBP-type profile. 100 177 IPR004333 GO:0003677
Mepo6g00776 758 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 66 583 IPR044817 GO:0003677
Mepo6g00776 758 SUPERFAMILY SBT domain 101 181 IPR036893 GO:0003677|GO:0005634
Mepo6g00776 758 Pfam SBP domain 103 177 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00776 Mepo-Chr6 8020495 8027999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00776 8 752 SBP-box Gene Family AT5G18830 46.474 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mepo6g00776 SBP 2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00776 - - aprc:113863838 1056.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00776 6 8020495 8027999 Mepo6g00776 6 8020495 8027999 ECH