LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo6g00761	ATGGGTTGTGTGTTTGGTAAACAGTCATCAGTGGAAGAGAGGAGAGAGGAAGTGAGAGAAGAGAAAGTAGATGTGGGTGGTGGTGGTGGTGGTGGTAGAGAGGTTGAGAATGTGAAAGAGGGTGGAGAGGAGAAGAGAGTTAGGCCTAGTGGGGAGAGAAGGAGAAGATCTTCGAAGGCGAATCCGAGGTTGAGTAATCCACCTAATAATGTTCATGGTGAACAGGTTGCAGCTGGTTGGCCTTCTTGGCTTTCTAAGGTTGCTGGTGAAGCTATTAATGGATTGGTTCCTAGGAGGGCTGATACTTTTGAGAAGCTTGATAAGATTGGGCAAGGTACATACAGCAATGTTTACAAAGCTAGGGATACTTTAACAGGGAAGGTTGTAGCCTTAAAGAAGGTCCGTTTTGACAATTTAGAGCCTGAGAGTGTGAAGTTCATGGCCAGAGAGATTCTGATTCTGCGTCGTTTGGATCATCCCAATGTTGTCAAACTGGAAGGCTTAGTGACATCTAGAATGTCATGCAGTTTATATCTTGTGTTTGAATACATGGCACATGATCTGGCTGGTCTTGCTACAAACCCTGCAATCAAGTTCACAGAGCCTCAGGTAAAATGTTACATGCATCAGCTATTTTCTGGGCTGGAACACTGTCACAACCGTCACGTGCTGCATCGTGATATAAAGGGTTCAAACCTTCTTATTGACAATGATGGAGTTCTCAAGATTGCTGATTTTGGGTTAGCTTCCTTCTTTGATCCTGATCACAAACACCCTATGACGAGTAGAGTGGTGACTTTATGGTATCGACCTCCAGAACTTCTTCTTGGAGCCACCGAATATGGTGTAGGCGTGGACCTCTGGAGTGCTGGCTGCATTCTTGCAGAATTGTTGGCTGGAAAACCCATCATGCCTGGTCGAACAGAGGTGGAGCAGCTGCATAAGATATTCAAGCTATGTGGTTCTCCTTCTGAAGACTACTGGAAAAAGTCAAAGTTGCCACATGCTACCATTTTTAAGCCCCAACAATCATACAAGCGATGCATAGCGGAGACGTTTAAGAATTTTCCGCCATCATCCCTGCCATTGATTGAGACCCTTCTCGCAATCGATCCAGATGAACGTATGACTGCCACTGCTGCACTGCATAGTGAATTCTTTACTACTAAACCATATGCCTGTGATCCCTCTAGCCTTCCTAAATATCCTCCCAGCAAGGAGATGGATGCAAAGCTACGGGATGAAGAAGCTAGAAGATTGAGAGCAGCTGGTAGATCAAATGCCGATGGTGTCAAGAAATCACGTCCACGTGAGCGAGTAAGGAGGGGACTTCCTGTTCCAGATGCCAATGCTGAACTGCAAGCAAATATTGATAGACGCCGATTGATCACGCACGCAAATGCTAAGAGCAAGAGTGAGAAATTTCCTCCTCCCCACCAAGACGGAGATCTAGGCTATCCTTTGGGTTCTTCCCAACACATGGATCCAGTTTTCGATCCTTCCGATGTTCCATTCAGTTCCACAAACTTGTCACTACCCAAAGCAGATATCCATACTTGGTCTGGTCCATTGGTAGATCCCAGCAGCATTGGTGCACCGAGGAGAAAGAAGAAACACGGCAGGTGA	1626	0.46	MGCVFGKQSSVEERREEVREEKVDVGGGGGGGREVENVKEGGEEKRVRPSGERRRRSSKANPRLSNPPNNVHGEQVAAGWPSWLSKVAGEAINGLVPRRADTFEKLDKIGQGTYSNVYKARDTLTGKVVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMAHDLAGLATNPAIKFTEPQVKCYMHQLFSGLEHCHNRHVLHRDIKGSNLLIDNDGVLKIADFGLASFFDPDHKHPMTSRVVTLWYRPPELLLGATEYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWKKSKLPHATIFKPQQSYKRCIAETFKNFPPSSLPLIETLLAIDPDERMTATAALHSEFFTTKPYACDPSSLPKYPPSKEMDAKLRDEEARRLRAAGRSNADGVKKSRPRERVRRGLPVPDANAELQANIDRRRLITHANAKSKSEKFPPPHQDGDLGYPLGSSQHMDPVFDPSDVPFSSTNLSLPKADIHTWSGPLVDPSSIGAPRRKKKHGR	541

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo6g00761	541	MobiDBLite	consensus disorder prediction	9	27	-	-
	Mepo6g00761	541	Gene3D	Transferase(Phosphotransferase) domain 1	186	426	-	-
	Mepo6g00761	541	ProSitePatterns	Protein kinases ATP-binding region signature.	109	132	IPR017441	GO:0005524
	Mepo6g00761	541	FunFam	probable serine/threonine-protein kinase At1g54610	186	427	-	-
	Mepo6g00761	541	CDD	STKc_CDK9_like	103	387	-	-
	Mepo6g00761	541	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	223	235	IPR008271	GO:0004672\|GO:0006468
	Mepo6g00761	541	MobiDBLite	consensus disorder prediction	420	445	-	-
	Mepo6g00761	541	MobiDBLite	consensus disorder prediction	36	59	-	-
	Mepo6g00761	541	SUPERFAMILY	Protein kinase-like (PK-like)	98	393	IPR011009	-
	Mepo6g00761	541	FunFam	probable serine/threonine-protein kinase At1g54610	90	185	-	-
	Mepo6g00761	541	MobiDBLite	consensus disorder prediction	454	478	-	-
	Mepo6g00761	541	SMART	serkin_6	103	387	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo6g00761	541	MobiDBLite	consensus disorder prediction	420	541	-	-
	Mepo6g00761	541	ProSiteProfiles	Protein kinase domain profile.	103	387	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo6g00761	541	PANTHER	CELL DIVISION PROTEIN KINASE	101	391	-	-
	Mepo6g00761	541	Pfam	Protein kinase domain	103	387	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo6g00761	541	MobiDBLite	consensus disorder prediction	1	75	-	-
	Mepo6g00761	541	Gene3D	Phosphorylase Kinase; domain 1	91	185	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo6g00761	Mepo-Chr6	7818914	7823695	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo6g00761	98	425	Core Cell Cycle Gene Families	AT5G10270	51.744	3.27e-118	357

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_CDK-CRK7-CDK9	Mepo6g00761		Pkinase	5e-69	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo6g00761	K08819		-	gmx:100779413	942.954