Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00756 ATGAAAATGATCAAAGACAAGGTGCATGATCTTCAATCAATTCTACAATTGGAGCTGAAGACTGTTGATGGCATTGGCCTCTCAAGCACCATCAATACATGTTTGGAGCTTCTAGAAATGTCCATTGAAGAGCTTCACTGGTGTGCATCTGCCTTGAAGAATCCCAAAGGAAAATACTATGGCACGGGTAACCTAAGTTCTGATTTAAGGACGTGGTTAAGTGCCATTCATGTCAATACGGATACATGTGTAGATGGACTTGAAGAAACCAATGACCAAATCAAAGATAAAGTGTCTATCAAAATTGATGAAGTTGACTCATTGGTTAATGATCTCCTCACCAATGTTAAGGTGCAGACCATTTCAGGTCAGTCTGCCAACAAGGGCCCATTCCCATCTTGGGTTAAACCAAGTGTCCAAAAGCTTCTATTGAAAAATGCAAAACAAAGTTTTGATGTGGTTGTTGCAGCAGATGGTACAGGGAATTTCACCAAGGTTATGGATGCGATGAATGCGGCGCCTGATTCCGGTATGAAGCAATATGTCATACTCATAAAAAACGGAGTTTACAAGGAAATTGTTGAGGTCAATAAGATGAATATCATGATGATTGGGGAGGGGATGTATGCAACAATTATCACTGGTAATTTGAGTAATGGAACTAATCACTTGGCCACATTCCAAACAGCAACTTTTGGTGTCAAAAGACCAGGATTCATCGCGCGAGACATTTCCTTTAGGAACACTGCTGGGCCTATAGATCACCAAGCAGTCGCTCTGAGATCCCAATCTGACCGGTCTGTATTCTACCGGTGTGGGATTTTTGGCTATCAGGACAGCTTGTATGCCTTTGCATTGCGCCAATTCTATAGGGAATGCCAAATCAGTGGCACGGTGGACTTTATCTTTGGATCTGCCATTGCTGTATTCCAAAACTGCACAATATTGGTGAAGAAAGGGTTGCCAGAACAAAGCAACACCATCACAGCTCAAGGAGGAAAATTCAATGGAGTTTCAACTGGCTTCTCCTTTCAGTTTTGCAACATATCTGCAGATTTTGACTTGTTACCTTCTTTAAAATCTACCTCAACGTTCCTTGGAAGACCATGGAAGCCATATTCAACAACGGTTTTCATGGAATCTTACATAGGTGATGTGATAATCTCAAAAGGATGGTTAGAGTGGAGCGGATCCCAAAACTTGGACACATTATACTATGCTGAGTATAAAAACAATGGGCCAGGAGCAGGGACACAAGACAGAGTAAAATGGCAACACTACCATGTCCTGAATGATTCTAGCCAGGCAATGAAGTTTACAGTGGCCGAATTCATTATGGGGAACCTATGGCTACTTTCAGCACATGTACCGTTCACTCCTGGACTTGGGGATCATACTTGA 1401 0.4204 MKMIKDKVHDLQSILQLELKTVDGIGLSSTINTCLELLEMSIEELHWCASALKNPKGKYYGTGNLSSDLRTWLSAIHVNTDTCVDGLEETNDQIKDKVSIKIDEVDSLVNDLLTNVKVQTISGQSANKGPFPSWVKPSVQKLLLKNAKQSFDVVVAADGTGNFTKVMDAMNAAPDSGMKQYVILIKNGVYKEIVEVNKMNIMMIGEGMYATIITGNLSNGTNHLATFQTATFGVKRPGFIARDISFRNTAGPIDHQAVALRSQSDRSVFYRCGIFGYQDSLYAFALRQFYRECQISGTVDFIFGSAIAVFQNCTILVKKGLPEQSNTITAQGGKFNGVSTGFSFQFCNISADFDLLPSLKSTSTFLGRPWKPYSTTVFMESYIGDVIISKGWLEWSGSQNLDTLYYAEYKNNGPGAGTQDRVKWQHYHVLNDSSQAMKFTVAEFIMGNLWLLSAHVPFTPGLGDHT 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00756 466 Pfam Plant invertase/pectin methylesterase inhibitor 24 113 IPR006501 GO:0004857
Mepo6g00756 466 ProSitePatterns Pectinesterase signature 2. 295 304 IPR033131 -
Mepo6g00756 466 FunFam Pectinesterase 146 462 - -
Mepo6g00756 466 Gene3D - 150 464 IPR012334 -
Mepo6g00756 466 Pfam Pectinesterase 152 448 IPR000070 GO:0030599|GO:0042545
Mepo6g00756 466 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 6 110 IPR035513 -
Mepo6g00756 466 PANTHER PECTINESTERASE 21 451 - -
Mepo6g00756 466 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 118 IPR035513 -
Mepo6g00756 466 SUPERFAMILY Pectin lyase-like 150 461 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00756 Mepo-Chr6 7786676 7790862 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00756 27 462 Carbohydrate Esterase AT3G43270 54.000 8.44e-164 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00756 K01051 - gmx:100777500 531.946