Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00743 ATGTTTTGTTACTATCGCAGAACATTGCTCTGCCCTAATAACCTCACATTCAGCTTCAAAACCCTAACAGTAACACAATCTTCATTCCTTCTTCATCTTCTCCAACCCTTTTCTTCTTCTTCTTCCCAAAATCACACTTTCACAGTCAACTATCTCATTCAAAATCTTGGGTTATCACCAGAAACTGCTTCCAAACTCTCCAACAAAATTCATCTCAACAATTCACAAAAACCAGACTCAGTCATCTCATTATTCAAATCACATGGCTTCTCAAACTCCCAGTTATCAACTCTTATCAAAAATCACCCAAAAATTCTCTCTTTAGATCCCAACAAAATCATTCCTCCCAAACTCAATTTCCTTCTCTCAAAGGGTGCTTCAAATTCAGACCTTGTTCACATCATCACCAGAAATCCTCTTATGTTGTCTCATAGCTTGGAAAATACAATAACCCCATCTTATGATTTAGTCAAAAGATTCTTACTTTCTGATCAATCTACCATTGCCGCTCTCAAAAGTTGCTCTTGTTTCCTTTATTCTAAATACCCATCTCACAATATTCAATTCCTGCTTCAAAATGGGGTACCTGAGTCTAAAGTTGTTATTTTGTTTCGAAATTGGTATTCTATATTTGCTGAGAAGCCTCCAAGATTTGAGAAGGCATTGATGGAAGTAAATGAATTAGGATTTGACCCCAAAACAACGGTTTTCATTGTTGCACTGCGTGCTAAGATTAATAAAAAATTACTTTGGGAAAGGAAGATTGATGTGTATAAGAAATGGGGTTGGTCTGAAGAAAGTTTTGTCTCAGCATTTTTGAAGTATCCATGGTGTATGTTGGCATCTGTTAATAAAATTGAGGCAGCAATGAAATTTTTCGTCGATCACATGGGTTGGAAGCCTAATGTGCTTGCAAAACACCCAATACTTCTTTTGCTGAGTCTTGAGAAAAGGGTTATTCCTAGGGCTTCTGTCTTGAAATTTCTTGAGTCTAAAGGTTTGATTAAGGATGCTAAATTGGCTGGACCTTTCCAACTTTCTGAGTGTTTGTTTTTGAAGAAGTTTGTGAATTGCTTTGAGGAAGAAGCTTCTCAACTGTTGAAGTTGTATGAAGAGAAAAAAGATGTTTCCAATAGGATGTTGAAAAAAGATTTTAAGGGGCAAAAGAGGTTGAAATATACCTCATAA 1188 0.362 MFCYYRRTLLCPNNLTFSFKTLTVTQSSFLLHLLQPFSSSSSQNHTFTVNYLIQNLGLSPETASKLSNKIHLNNSQKPDSVISLFKSHGFSNSQLSTLIKNHPKILSLDPNKIIPPKLNFLLSKGASNSDLVHIITRNPLMLSHSLENTITPSYDLVKRFLLSDQSTIAALKSCSCFLYSKYPSHNIQFLLQNGVPESKVVILFRNWYSIFAEKPPRFEKALMEVNELGFDPKTTVFIVALRAKINKKLLWERKIDVYKKWGWSEESFVSAFLKYPWCMLASVNKIEAAMKFFVDHMGWKPNVLAKHPILLLLSLEKRVIPRASVLKFLESKGLIKDAKLAGPFQLSECLFLKKFVNCFEEEASQLLKLYEEKKDVSNRMLKKDFKGQKRLKYTS 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00743 395 PANTHER CGI-12 PROTEIN-RELATED 45 361 IPR003690 GO:0003690|GO:0006355
Mepo6g00743 395 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Mepo6g00743 395 SMART mt_12 132 163 IPR003690 GO:0003690|GO:0006355
Mepo6g00743 395 SMART mt_12 96 127 IPR003690 GO:0003690|GO:0006355
Mepo6g00743 395 SMART mt_12 301 335 IPR003690 GO:0003690|GO:0006355
Mepo6g00743 395 FunFam Mitochondrial transcription termination factor-like 146 363 - -
Mepo6g00743 395 Gene3D Transcription termination factor 3, mitochondrial 181 369 IPR038538 -
Mepo6g00743 395 Gene3D Transcription termination factor 3, mitochondrial 44 180 IPR038538 -
Mepo6g00743 395 Pfam mTERF 185 345 IPR003690 GO:0003690|GO:0006355
Mepo6g00743 395 Pfam mTERF 82 234 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00743 Mepo-Chr6 7652530 7654394 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mepo6g00743 mTERF 9.9e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00743 K15032 - gmx:102663105 412.149