Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00742 ATGCTTTGTTATTTTCGCAGACCATTACTCTTCTCATTCAAAACCTCAACAACTCTTCATCTTCTCCAACCCTTTTCTTCTTCTTCTTCTTCTTCTTTCCAAAATCACTCTTTTACAGTAAACTACCTCATTCAAAATTGTGGGTTTTCACCAGAAACTGCTTCTAAACTCTCCAACCGAGTTCATCTCAACAACTCACAAAAACCTGATTCAGTCCTCGCCTTATTCAAATCGTATGGTTTCTCTAATTCCCAATTATCATCTCTCATCAAAACTCGCACAGATATTCTCTCTTATGATCCCAACAAAACCATTCTTCCTAAATTCAATTTCCTTCTCTCCAAGGGTGCTTCAAATTCAGACCTTGTTCACATCATCACCAGAAACCCTCTTATGTTGTCTCAAAGCTTGAAAAATACAATAACCCCTTGTTATGATTTTATCAAAAGATTCTTACTTTCTGATCAATCTACCATTGCCGCTCTTAAACATTGCTCTTGTTTCCTTTATTCTAAATACCCATCTCACAATATTCAATTCCTGCTTCAAAATGGGGTTCCTGAATCCAAAATTGTTTTTTTGTTTCGAAATTGGTATTACATGCTCTCTGAGAAACCTCCAATATTTGAGAAGGCAGTGATGGAAGTAAAACAATTAGGATTCAACCCTGATAAAACGTTTTTCCTTATCGCACTGCATGCTAAGATTAGTCCAAAATCTGTATGGGAAAGGAAGATTAATGTGTATAAGAAATGGGGTTGGTCTGATGAAATTATTGCCTCAGCATTTTTGAAGTATCCATGGTGTATGTTGGCATCTGTGGAAAAAATTGAAGCAGTGATGCAGTTTTTTGTCAATCACATGGGTTGGGAGTCTAATGTGCTTGCCAAATATCCAATACTTCTTATGCTGAGTTTGGAAAAAAGGGTTATTCCTAGGGCTTTTGTCTTGAAATTTCTTCAATCCAAAGGTTTGATTAAGGATGCTAAATCCCCTGCACCTTTCAAAGTCCCTGAGGATCTGTTTTTGAAGAGATATGTGAATTGCTTTGAGGAAGACGCATCTCATTTGTTGAAGTTGTATGAAGAGAAAAGAGATGCTTCAACTTTCAAATAA 1116 0.3638 MLCYFRRPLLFSFKTSTTLHLLQPFSSSSSSSFQNHSFTVNYLIQNCGFSPETASKLSNRVHLNNSQKPDSVLALFKSYGFSNSQLSSLIKTRTDILSYDPNKTILPKFNFLLSKGASNSDLVHIITRNPLMLSQSLKNTITPCYDFIKRFLLSDQSTIAALKHCSCFLYSKYPSHNIQFLLQNGVPESKIVFLFRNWYYMLSEKPPIFEKAVMEVKQLGFNPDKTFFLIALHAKISPKSVWERKINVYKKWGWSDEIIASAFLKYPWCMLASVEKIEAVMQFFVNHMGWESNVLAKYPILLMLSLEKRVIPRAFVLKFLQSKGLIKDAKSPAPFKVPEDLFLKRYVNCFEEDASHLLKLYEEKRDASTFK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00742 371 Gene3D Transcription termination factor 3, mitochondrial 32 174 IPR038538 -
Mepo6g00742 371 Gene3D Transcription termination factor 3, mitochondrial 175 360 IPR038538 -
Mepo6g00742 371 SMART mt_12 123 154 IPR003690 GO:0003690|GO:0006355
Mepo6g00742 371 SMART mt_12 87 118 IPR003690 GO:0003690|GO:0006355
Mepo6g00742 371 SMART mt_12 260 291 IPR003690 GO:0003690|GO:0006355
Mepo6g00742 371 SMART mt_12 292 326 IPR003690 GO:0003690|GO:0006355
Mepo6g00742 371 FunFam Mitochondrial transcription termination factor-like 137 354 - -
Mepo6g00742 371 Pfam mTERF 73 267 IPR003690 GO:0003690|GO:0006355
Mepo6g00742 371 Pfam mTERF 240 328 IPR003690 GO:0003690|GO:0006355
Mepo6g00742 371 PANTHER CGI-12 PROTEIN-RELATED 35 351 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00742 Mepo-Chr6 7645042 7646331 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mepo6g00742 mTERF 3.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00742 K15032 - gmx:102663105 402.134