Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00739 ATGTCAACCTCTAGAACTTCAAACACTTCCCTTAAAGGGCATGATCATCATCACAATCCAATCCAAATAAATTTATCTCTTCTTCAACGAAACACGTCGGTTTGTGGCGAAAAAAGAGGCAGAAAAAAGCAAGCAGAACCAGGTAAGTTTCTTGGTGTAAGGAGAAGACCTTGGGGTAGATATGCTGCTGAAATTAGAGATCCTGCAACTAAAGAAAGACATTGGCTAGGAACATTTGATACTGCTCAAGAAGCTGCTTTTGCTTATGATAGAGCTGCTCTTTCCATCAAAGGTAGCAATGCTAGAACAAATTTCATATATCCTTCTTCTTCTGATGAAGATGATGCCAATTTTCACAATGTTGTTGCTCCTTTGGATGTTCAAAAAACACAACCAATTACCAATCAAAATAGCCTCTCTCAGCTTGATTCTAATTCTCATTTGAACAATGACAATTTGTTATTCTCTAATGATTATAATAACTCAGGCTATCTTGAAAGCATTGTTCCTGTTAATTGCTTCAAACCTATTTCCAACACCAACGATTCAAACTTAGATCATAGGAGTAATGCAAGTGAACCCCAAAATGTAGTTGATTCCATTAGCAAAACAAACTTCATGCATGGTCAATCATTTTTTGACTACACTCCATTCTCTCAAGAAGCATATGACATTAACACAAGTGATTGTAGTGAAGGATTATGGGATTGCAATTACAATGAACTTTCAGCTATTTTTAACCAACCACCAAGGAGTGATAGTCCAAGCTATGGACTAATGACAACTCAAGATGTTTCTTCAACTACCTATTCTTCTCATTCATATTCTCCTTTCGGCGATGTCGACATGGGAATGGGATACTCACTCTTCTGA 873 0.37 MSTSRTSNTSLKGHDHHHNPIQINLSLLQRNTSVCGEKRGRKKQAEPGKFLGVRRRPWGRYAAEIRDPATKERHWLGTFDTAQEAAFAYDRAALSIKGSNARTNFIYPSSSDEDDANFHNVVAPLDVQKTQPITNQNSLSQLDSNSHLNNDNLLFSNDYNNSGYLESIVPVNCFKPISNTNDSNLDHRSNASEPQNVVDSISKTNFMHGQSFFDYTPFSQEAYDINTSDCSEGLWDCNYNELSAIFNQPPRSDSPSYGLMTTQDVSSTTYSSHSYSPFGDVDMGMGYSLF 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00739 290 FunFam Ethylene-responsive transcription factor 2 49 107 - -
Mepo6g00739 290 ProSiteProfiles AP2/ERF domain profile. 49 106 IPR001471 GO:0003700|GO:0006355
Mepo6g00739 290 PRINTS Ethylene responsive element binding protein signature 50 61 IPR001471 GO:0003700|GO:0006355
Mepo6g00739 290 PRINTS Ethylene responsive element binding protein signature 72 88 IPR001471 GO:0003700|GO:0006355
Mepo6g00739 290 MobiDBLite consensus disorder prediction 1 20 - -
Mepo6g00739 290 Pfam AP2 domain 50 98 IPR001471 GO:0003700|GO:0006355
Mepo6g00739 290 SUPERFAMILY DNA-binding domain 49 106 IPR016177 GO:0003677
Mepo6g00739 290 CDD AP2 49 105 IPR001471 GO:0003700|GO:0006355
Mepo6g00739 290 SMART rav1_2 49 112 IPR001471 GO:0003700|GO:0006355
Mepo6g00739 290 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 37 187 - -
Mepo6g00739 290 Gene3D AP2/ERF domain 49 107 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00739 Mepo-Chr6 7602435 7603307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00739 1 107 AP2-EREBP Transcription Factor Family AT5G18560 60.833 4.08e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo6g00739 AP2 7e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00739 - - mtr:11443354 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00790 1 7551707 7552357 Mepo6g00739 6 7602435 7603307 PCT