Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00738 ATGGACCACTTTCCTCGCTCCACTCAACCTGATCCGTCTTCTCAATGGACCGGACCGGATTCTCAAACCGGTTTAGAAGAACCTATGTGGCAATTGGGGTTAGGTGGTGAAGATTCCTATCCACAACGACCTGATGAGGTTGATTGTACTTACTATTTGAGAACTGGTTTTTGTGGCTTTGGTTCTAGGTGTCGGTTCAATCATCCTCGTGACCGTGCTGCGGTTATTGGAGCTGCTTCTAGGACTGTTGGGGAGTATCCTGAACGTGTTGGACAGCCTGTCTGCCAGTATTATATGAGGACAAGATCTTGCAAATTTGGTGCATCTTGCAAGTATCATCATCCGAAACAGATAGGAGCCACTGATGCTAGCCCTGTATCACTAAATTATTATGGATATCCATTACGTCCGGGTGAAAAGGAATGTTCATATTTTGTGAAAACGGGACAATGCAAGTTTGGTGCAACTTGTAAATTTGATCATCCAGTTCCTGCCAGTGTACAAATTCCAGCTCCATCGCCGGTTCCCCCGGTTTCACCTTTACATGTACCAGTACCTTCCCCATTGTATCCAACCGTACAGACTCCATCTGGACCTTCTTCACAACAAATTGGGGTACTGGTCGCAAGGCCACCTCTACTACATGGTTCGTTTGTCCAGAGCCCCTATGGACCTATGGTATTGTCCCCAACCATGGTTCCTTTTTCTGGATGGGGTCCTTATCAGGCTACTGCAACAAGCCCTGTACTGCCTTCTGGTTCTCCAGCTAATGTTGGTTCCACACAGCTTTATGGGATAACCCAGCTACCTTCACCGGGTAATGCCTATACTGGACCTTATCAACTTTCTGGTTCCTCAGTCGGTCCTTCAAGCAGAAATCAGAACGAGCAATCATTTCCAGCAAGTCCTAATCAACCCGAGTATCATTATTACTCCAAACCAGAGGAGCTTCCTTTTGCTCCATCTTATAGGTATCACAAACCACCAGACATGAGTGCACCAAAAGTGAATGCCGTCCTTAGCCCTGCAGGTCTTCCGTTACGTCCGGGGGCAGCACTTTGCACTCATTACGCACAGCGTGGTATATGCAAGTTTGGTCCTGCATGCAAATTTGATCATCCTATTACACCACTGAGTTACAGTCCATCTGCCTCTTCCCTGACAGATGTACCAGTTGCACCCTACTTTGTGGGTTCATCCGTTGGCACTCTTGTTCCTTCATCTTCTTCACCAGAGTTGCAGCCAGAACTTACTGCAGGATCCGGCAGGGAGTCTGTTCCATCCAGAATATCGTCATCAGTAAGCACATCAACTGGATCAGTTGGCTTGACTTTGCCAACTGGTGGCCCTGTTTCTCAATCAAGCACTCGAAGTTCTAGTCCTTTAGCACCTGCCAATACCACGACAAGTAGCAATGTTTCTCACCCCTCAAATTAA 1437 0.4718 MDHFPRSTQPDPSSQWTGPDSQTGLEEPMWQLGLGGEDSYPQRPDEVDCTYYLRTGFCGFGSRCRFNHPRDRAAVIGAASRTVGEYPERVGQPVCQYYMRTRSCKFGASCKYHHPKQIGATDASPVSLNYYGYPLRPGEKECSYFVKTGQCKFGATCKFDHPVPASVQIPAPSPVPPVSPLHVPVPSPLYPTVQTPSGPSSQQIGVLVARPPLLHGSFVQSPYGPMVLSPTMVPFSGWGPYQATATSPVLPSGSPANVGSTQLYGITQLPSPGNAYTGPYQLSGSSVGPSSRNQNEQSFPASPNQPEYHYYSKPEELPFAPSYRYHKPPDMSAPKVNAVLSPAGLPLRPGAALCTHYAQRGICKFGPACKFDHPITPLSYSPSASSLTDVPVAPYFVGSSVGTLVPSSSSPELQPELTAGSGRESVPSRISSSVSTSTGSVGLTLPTGGPVSQSSTRSSSPLAPANTTTSSNVSHPSN 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00738 478 MobiDBLite consensus disorder prediction 424 478 - -
Mepo6g00738 478 SUPERFAMILY CCCH zinc finger 351 378 IPR036855 GO:0046872
Mepo6g00738 478 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 45 70 IPR000571 GO:0046872
Mepo6g00738 478 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 351 374 IPR000571 GO:0046872
Mepo6g00738 478 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 138 162 IPR000571 GO:0046872
Mepo6g00738 478 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 92 116 IPR000571 GO:0046872
Mepo6g00738 478 ProSiteProfiles Zinc finger C3H1-type profile. 43 71 IPR000571 GO:0046872
Mepo6g00738 478 MobiDBLite consensus disorder prediction 7 24 - -
Mepo6g00738 478 SUPERFAMILY CCCH zinc finger 45 72 IPR036855 GO:0046872
Mepo6g00738 478 PANTHER PROTEIN PHOSPHATASE RELATED 24 385 - -
Mepo6g00738 478 MobiDBLite consensus disorder prediction 1 41 - -
Mepo6g00738 478 ProSiteProfiles Zinc finger C3H1-type profile. 136 164 IPR000571 GO:0046872
Mepo6g00738 478 Gene3D - 41 122 - -
Mepo6g00738 478 MobiDBLite consensus disorder prediction 275 305 - -
Mepo6g00738 478 Gene3D - 348 400 - -
Mepo6g00738 478 ProSiteProfiles Zinc finger C3H1-type profile. 89 117 IPR000571 GO:0046872
Mepo6g00738 478 SUPERFAMILY CCCH zinc finger 138 164 IPR036855 GO:0046872
Mepo6g00738 478 Gene3D - 123 171 - -
Mepo6g00738 478 MobiDBLite consensus disorder prediction 404 478 - -
Mepo6g00738 478 SUPERFAMILY CCCH zinc finger 92 116 IPR036855 GO:0046872
Mepo6g00738 478 ProSiteProfiles Zinc finger C3H1-type profile. 348 376 IPR000571 GO:0046872
Mepo6g00738 478 SMART c3hfinal6 348 375 IPR000571 GO:0046872
Mepo6g00738 478 SMART c3hfinal6 136 163 IPR000571 GO:0046872
Mepo6g00738 478 SMART c3hfinal6 89 116 IPR000571 GO:0046872
Mepo6g00738 478 SMART c3hfinal6 43 70 IPR000571 GO:0046872
Mepo6g00738 478 MobiDBLite consensus disorder prediction 275 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00738 Mepo-Chr6 7595341 7601519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00738 11 435 C2H2 Transcription Factor Family AT5G18550 53.483 3.92e-137 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mepo6g00738 zf-CCCH 8.6e-09 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00738 - - gmx:100812433 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00738 6 7595341 7601519 Mepo6g00738 6 7595341 7601519 ECH
Mepo1g00789 1 7543377 7547796 Mepo6g00738 6 7595341 7601519 PCT