Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00729 ATGTCATTTTCCAGTCTCAAAAACTTCTTCCAGAGGTTCTGGTTGGACGAAATGGAAATGGGAAGTTATACACATAGCAGCTTTTTGTCTAGTGATCTTCTACCATCTCTTGGCGCCCGAACAAACCAGGAAACTAGACTACGAAAATACATAATCTCCCCATTCAATCCTCAATATAGGCTTTGGGAGTTGCTACTGATTGTTCTAGTCATATACTCAGCTTGGATATGCCCCTTTGAGTTTGCCTTTCTGACGTATAAGCAAAATGGACTATTCATCATAGACAACATTGTCAATGGCTTCTTCGCCATCGACATCGTGCTTACATTCTTCGTTGCATACCACGATAGTCATTCTTCTCTTCTCATTGATGATCCAAAGAAAATTGCAACCAGTTACATGTCCACCTGGTTTGTTTTGGATATCTGCTCAACAGCACCACTTGAGCCCATTAGTCTCCTCTTCACTACTTATGACAGTGAGCTTGGTTTCAAACTGCTTAACATGTTGCGATTATGGCGCCTGAGACGAGTCAGTTCTCTGTTTGCAAGACTCGAAAAGGACATTCGATTCAATTACTTCTGGGTTAGGTGCACAAAGCTCACCGCTGTAACCTTGTTTGCAGTGCACTGTGCAGGATGCTTTAACTATCTAATTGCAGATATGTACCCTGATTCCAAAAGAACTTGGATAGGTGCTATGTACCCAAATTTTAAAGAACAAAGTCTTTGGGACAGATACGTAACTTCAATATACTGGTCTATCGTCACGCTTACTACCACTGGCTATGGAGATTTACATGCAGAAAACACCATAGAGATGTTGTTTGATATCACTTACATGCTGTTCAACTTGGGTTTAACAGCATACATCATTGGAAACATGACTAACCTTGTAGTTCACTGGACCAGCCGCACCCAAAATTTTAGGGATACAGTCAAAGCAGCTTCTGAGTTTGCTTCAAGAAATCATCTGCCACGTCGCGTACACAATCAAATGTTGGCACACATTTGTTTGAGGTTTAAAACAGAAGGACTGAAGCAGCAAGAAGCATTAAATGATCTTCCAAAGGCGATTCGGTCAAGCATCGCACACCATCTCTTTTTTCCTGTTGTGCAGAAGGTCTACCTCTTCCAAGGAGTCTCTAATGACTTCCTTTTCCAACTGGTTTCAGAAATGGAAGCTGAGTATTTCCCACCAAAGGAAGATGTGATACTGCAAAATGAGTCTCCCACCGACCTTTATGTACTGGTTTCAGGCGCAGTGGTTTTTGACAAAGCAACTGCAGTAGAAACATTTGGAGAGATTGGAGTTTTATATCAAGTACCGCAACCTTTCACAGTTCGAACCACGGAGCTTTCTCAGATTTTAAGAATCAACAGGACATCCCTAATGAATGTTTTACAGGCAAATCCAGGAGATACACAGATTGTGATGAATAACCTTTTAATGAGATTAAAGGAGCGTGAAGGATTCGACTCTGAATATCCACACACAGATCATGGATTGGTTCTATATAAATTGCTAGGTAACACAAAAGAAAGCTCTTCTCAAGAGTCTACAAATAATTTACATGGCCATTGCTTAATGCGTGAAGGAGAGAACATAAATATCAGAGACTCACAGAATAATTTGCATATTGTAACTAATGATGTTTATTCAGTCCCTAATAACATGATACCTGAGTATGGCAAAAGAGATCTCCATGCCGCTGTGCTGCCTGTGCATAAGGGGAAACTAGACATTGTTGAAATTCTGATTGAAAGAGATGCAAATGCAAAGAACTCAAATACCATAGGGTGGACACAAAAAGCTTTAGTACAACAGTTAAAAAACAAGAGCATATCTGACCATACAATGTATTGTGAAAGCGAGAAGAAATCAGATGAACATAGAATAGAGATTATTGAGCCACAAATCCTTAACTTCGGCAAGAATAGCTCAACCAGAAACAGTAGACAGGATGGTATTAGAACTATCAACTTCCCATTAGAGAAAGTGTACACAGACACCAATTCAAGAAATTCCAATTGTCCAAGTGACATAGAAATGGCAAGGTTCGCCAAGAAGAGGGTAACAATCCATTTGCCAAGTGGATGGAGAAGTAGCTCACATGGACAGCACGGAAAACTGATAATCCTACCTGATTCATTAGAAGAGCTGCTCAAAATTGCTGGTGAAAAATTTGGCTGCTTCAATGCCACAAAAGTAATTAATAAAGAGAATGCAGAGATAGACGACATTGATGTCATTAGAGATGGTGATCATCTCTTTCTTATTGGCGGTGATAGTGACAATTTGAACTCATGA 2310 0.4 MSFSSLKNFFQRFWLDEMEMGSYTHSSFLSSDLLPSLGARTNQETRLRKYIISPFNPQYRLWELLLIVLVIYSAWICPFEFAFLTYKQNGLFIIDNIVNGFFAIDIVLTFFVAYHDSHSSLLIDDPKKIATSYMSTWFVLDICSTAPLEPISLLFTTYDSELGFKLLNMLRLWRLRRVSSLFARLEKDIRFNYFWVRCTKLTAVTLFAVHCAGCFNYLIADMYPDSKRTWIGAMYPNFKEQSLWDRYVTSIYWSIVTLTTTGYGDLHAENTIEMLFDITYMLFNLGLTAYIIGNMTNLVVHWTSRTQNFRDTVKAASEFASRNHLPRRVHNQMLAHICLRFKTEGLKQQEALNDLPKAIRSSIAHHLFFPVVQKVYLFQGVSNDFLFQLVSEMEAEYFPPKEDVILQNESPTDLYVLVSGAVVFDKATAVETFGEIGVLYQVPQPFTVRTTELSQILRINRTSLMNVLQANPGDTQIVMNNLLMRLKEREGFDSEYPHTDHGLVLYKLLGNTKESSSQESTNNLHGHCLMREGENINIRDSQNNLHIVTNDVYSVPNNMIPEYGKRDLHAAVLPVHKGKLDIVEILIERDANAKNSNTIGWTQKALVQQLKNKSISDHTMYCESEKKSDEHRIEIIEPQILNFGKNSSTRNSRQDGIRTINFPLEKVYTDTNSRNSNCPSDIEMARFAKKRVTIHLPSGWRSSSHGQHGKLIILPDSLEELLKIAGEKFGCFNATKVINKENAEIDDIDVIRDGDHLFLIGGDSDNLNS 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00729 769 SUPERFAMILY Voltage-gated potassium channels 54 299 - -
Mepo6g00729 769 CDD CAP_ED 377 479 IPR000595 -
Mepo6g00729 769 PANTHER POTASSIUM CHANNEL AKT1 25 547 IPR045319 GO:0005249|GO:0006813
Mepo6g00729 769 FunFam Potassium channel KAT3 61 301 - -
Mepo6g00729 769 ProSiteProfiles cAMP/cGMP binding motif profile. 377 485 IPR000595 -
Mepo6g00729 769 SMART cnmp_10 377 483 IPR000595 -
Mepo6g00729 769 Pfam Cyclic nucleotide-binding domain 397 470 IPR000595 -
Mepo6g00729 769 Gene3D Helix hairpin bin 301 363 - -
Mepo6g00729 769 FunFam Potassium channel KAT2 365 490 - -
Mepo6g00729 769 ProSiteProfiles KHA domain profile. 691 769 IPR021789 -
Mepo6g00729 769 Gene3D Jelly Rolls 364 490 IPR014710 -
Mepo6g00729 769 SUPERFAMILY cAMP-binding domain-like 304 486 IPR018490 -
Mepo6g00729 769 Gene3D - 60 300 - -
Mepo6g00729 769 Pfam Ion transport protein 60 307 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mepo6g00729 769 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo6g00729 769 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo6g00729 769 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo6g00729 769 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo6g00729 769 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo6g00729 769 Pfam KHA, dimerisation domain of potassium ion channel 690 759 IPR021789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00729 Mepo-Chr6 7472146 7476270 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00729 670 759 Ion Channels AT5G46240 48.387 3.14e-18 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00729 K21867 - gmx:100811356 1128.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00729 6 7472146 7476270 Mepo6g00729 6 7472146 7476270 ECH