Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00707 ATGAGGAGGAATTGCAACTTGGAATTATGTCTTTTTCCTCCATACAATTCTAGCAATCACCAAAATCACCCCATGGTAGAAGAAGAAGATAGTAATGAGAGTACTCCAATGCAAAATCAGCAACAGCCACTGACCATTTTCTACGATGGCAAGATGTGTGTTACTGATGTCACAGAGCTTCAGGCCAAATCCATCTTAATGCTGGCAAATAGAATTAAGGTGCAAGAAAAAGTGATGGCACCAATAGGGTCAGAACCATCAACACCAACAATAGTGCAATCTCCTCATCAATTGTATAGCCCTGGACCAGGTCTTTCCATGAAAAGATCTTTGCAAAGGTTTCTACAGAAGAGAAAGAATAGGGTCCAAGAAGCATCTCCATATCATCACTAG 393 0.4071 MRRNCNLELCLFPPYNSSNHQNHPMVEEEDSNESTPMQNQQQPLTIFYDGKMCVTDVTELQAKSILMLANRIKVQEKVMAPIGSEPSTPTIVQSPHQLYSPGPGLSMKRSLQRFLQKRKNRVQEASPYHH 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00707 130 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 20 128 IPR040390 -
Mepo6g00707 130 MobiDBLite consensus disorder prediction 82 106 - -
Mepo6g00707 130 Pfam Jas motif 108 128 IPR018467 -
Mepo6g00707 130 ProSiteProfiles Tify domain profile. 37 71 IPR010399 -
Mepo6g00707 130 MobiDBLite consensus disorder prediction 18 40 - -
Mepo6g00707 130 Pfam tify domain 40 70 IPR010399 -
Mepo6g00707 130 SMART tify_2 37 71 IPR010399 -
Mepo6g00707 130 MobiDBLite consensus disorder prediction 86 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00707 Mepo-Chr6 7275011 7277957 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00707 1 129 Tify Gene Family AT1G30135 45.455 5.74e-27 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mepo6g00707 tify 3.1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00707 - - gmx:100803886 178.718