Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00671 ATGAGACTCTCTTCAGCTGGTTTTAGTCCTCCACCCCAAGAAGGGGAAAAGAGAGTTCTAGATTCAGAACTTTGGCATGCATGTGCTGGCCCTCTTGTCTCTTTGCCAGCAGTTGGAAGTAGAGTTGTGTACTTTCCACAAGGTCACAGTGAACAAGTGGCTGTGTCAACCAACAAGGAAGTCGATGCACATATCCCAAACTATCCAAGCTTACCTCCTCAGCTTATTTGTCAACTTCATAATTTGACTATGCATGCTGATGTGGAGACCGATGAGGTGTATGCGCAGATGACCTTGCAACCTCTGAATGCTCAAGAGCAAAAAGAGGCTTACCTTCCAGCAGAGTTGGGAACTCCAAGTAAACAGCCGACAAACTACTTTTGCAAGACCTTGACTGCTAGTGACACAAGCACTCACGGGGGATTCTCTGTGCCTCGCCGGGCGGCTGAAAAAGTGTTTCCTCCTTTGGATTTCTCCCAACAGCCTCCTGCTCAAGAGTTAATAGCAAGGGATTTGCATGGTAACGAATGGAAATTCAGACATATCTTCCGAGGCCAGCCCAAAAGGCATCTACTTACAACTGGATGGAGTGTTTTTGTGAGTGCTAAAAGACTTGTTGCTGGTGATTCTGTGCTGTTTATCTGGAATGAAAAGAACCAATTGCTTCTTGGCATCCGCCGTGCTAGCCGACCACAAACTGTGATGCCCTCCTCAGTATTGTCAAGTGATAGTATGCATTTGGGACTTCTTGCTGCAGCAGCTCATGCGGCTGCAACCAATAGCCGTTTCACTATTTTCTATAACCCACGTGCGTGTCCATCCGAATTTGTCATACCCTTAGCGAAGTATGTTAAAGCTGTGTATCATACTCGAGTTTCAGTTGGTATGCGTTTCAGGATGCTCTTTGAAACAGAGGAGTCTAGTGTGCGACGATACATGGGCACAATAACTGGCATTTGTGACCTGGATTCTGTCCGGTGGCCGAACTCACATTGGCGCTCGGTAAAGGTTGGTTGGGATGAATCCACTGCCGGAGAAAGGCAACCTAGAGTGTCTTTGTGGGAAATCGAACCATTAACAACATTTCCTATGTATCCGTCACCATTCCCTCTTAGGCTTAAACGACCATGGCCTCCTGGATTACCTTCGTTCCATGGCATGAAAGATGATGATTTTGGCATGAATTCTCCTTTGATGTGGCTCCGAGACACGGATAGAGGGCTTCAATCTCTTAATTATCAAGGGATTGGGGTTAATCATTGGATGCAGCCAAGGTTTGATCCTGCCATGCTGAATATGCAAACCGATATGTATCAAGCTGTGGCTGCTGCTGCACTTCAGGACATGAGGACTGTAGTAGATCCTTCCAAACAGCTTCCTGGTTCCTTGCTTCAATTTCAGCAACCACCGAACTTCCCAAACAGGACCGCTGCTTTAATGCAGGCGCAGATGTTGCAACAGTCGCAGCCTCAACAGGCTTTCCAAAATAATAATCAGGAGAATCAAAATTTGTCGCAATCTCAGCCACAAGCTCAGACTAATCCTCAACAGCATCTACAGCATCAGCACTCATTCAATAATCAACTCAATCATCATAACCAGCAGCAACAACAAACTCCACAGCAAGTGGTGGATAATAATCAGCAGATATCTGGTTCAGTCTCTACAATGTCTCAGTTTGTTTCAGTGACTCAACCTCAATCACCACCACCCATGCAAGCTCTCTCTTCACTATGCCATCAGCAGAGTTTTTCTGATTCAAATGTGAACTCTTCAACTACTATTGTTTCTCCTTTGCACAGTATCATGGGTTCATCGTTTCCGCATGATGAATCATCCCACCTTATGAGTCTTCCAAGAACAAGCTCTTGGGTTCCTGTTCAAAATTCAACTGGTTGGCCATCCAAGCGCATTGCGGTGGATCCACTCCTCTCTTCAGGAGCATCTCAATGTATTCTGCCTCAGGTGAATCAGTTAGGGCAGGCACAGAATTCAATGTCTCAAAATGCTATTACTTTGCCACCGTTTCCTGGTAGGGAGTGCTCAATAGACCAAGAAGCGAGCAATGATCCGCAAAGTAATCTTTTATTCGGTGTCAATATAGATCCCTCATCTCTTCTAATGCATAATGGGATGTCGAACTTTAAGGGGATCAGTGGCAACAACAATGATTCCTCAACCATGTCCTACCATCAATCTTCTAATTACATGAACACCACAGGCGCTGATTCTTCGTTGAATCATGGAGTAATGCGTAGTATTGGTGAATCTGGTTTCTTGCATACCCCGGAAAATGGGGAGCAAGGAAACAACCCACTGAACAAGACCTTTGTGAAGGTTTATAAATCAGGGTCCTTCGGAAGATCGTTGGATATCACTAAATTCAGCAGCTACAATGAGCTGCGTAGTGAGCTCGCCCGAATGTTCGGACTGGAAGGCGAGTTGGAGGATCCTGTGAGATCAGGCTGGCAGCTTGTATTCGTTGACCGAGAGAATGATGTTCTTCTCCTCGGTGATGGCCCTTGGCCGGAATTCGTGAATAGTGTATGGTGTATCAAGATACTTTCGCCCGAGGAAGTGCAGCAAATGGGCAACACTGGCCTCGGGCTTTTGAACTCGGTTCCAATTCAAAGGCTCTCAAATAGCATTTGTGATGACTATGTGAGCCGTCAAGATTCAAGAAATCTAAGCAGTGGGATAACAACTGTGGGATCTCTAGACTACTAA 2727 0.4576 MRLSSAGFSPPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQLHNLTMHADVETDEVYAQMTLQPLNAQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRACPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGMKDDDFGMNSPLMWLRDTDRGLQSLNYQGIGVNHWMQPRFDPAMLNMQTDMYQAVAAAALQDMRTVVDPSKQLPGSLLQFQQPPNFPNRTAALMQAQMLQQSQPQQAFQNNNQENQNLSQSQPQAQTNPQQHLQHQHSFNNQLNHHNQQQQQTPQQVVDNNQQISGSVSTMSQFVSVTQPQSPPPMQALSSLCHQQSFSDSNVNSSTTIVSPLHSIMGSSFPHDESSHLMSLPRTSSWVPVQNSTGWPSKRIAVDPLLSSGASQCILPQVNQLGQAQNSMSQNAITLPPFPGRECSIDQEASNDPQSNLLFGVNIDPSSLLMHNGMSNFKGISGNNNDSSTMSYHQSSNYMNTTGADSSLNHGVMRSIGESGFLHTPENGEQGNNPLNKTFVKVYKSGSFGRSLDITKFSSYNELRSELARMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPEEVQQMGNTGLGLLNSVPIQRLSNSICDDYVSRQDSRNLSSGITTVGSLDY 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00671 908 FunFam Auxin response factor 291 363 - -
Mepo6g00671 908 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 864 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mepo6g00671 908 SMART B3_2 127 229 IPR003340 GO:0003677
Mepo6g00671 908 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Mepo6g00671 908 Gene3D - 291 363 - -
Mepo6g00671 908 ProSiteProfiles PB1 domain profile. 775 859 IPR000270 GO:0005515
Mepo6g00671 908 FunFam Auxin response factor 125 229 - -
Mepo6g00671 908 FunFam Auxin response factor 770 864 - -
Mepo6g00671 908 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mepo6g00671 908 SUPERFAMILY CAD & PB1 domains 772 850 - -
Mepo6g00671 908 Gene3D - 125 228 IPR015300 -
Mepo6g00671 908 Gene3D - 772 864 - -
Mepo6g00671 908 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Mepo6g00671 908 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Mepo6g00671 908 CDD B3_DNA 126 227 IPR003340 GO:0003677
Mepo6g00671 908 MobiDBLite consensus disorder prediction 498 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00671 Mepo-Chr6 6968540 6974741 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00671 1 484 B3 DNA Binding Superfamily AT1G30330 86.912 0.0 856
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mepo6g00671 B3 2e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00671 - - gmx:100796447 1475.69