Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00670 ATGATATGGTTTTTTTTTAGGAGAAATGAAAGAACTACGAAAACGTTTAGGATTAGGGTTTATCAGCGGCAGCAACATTTCACACTTCGTTCGAACTCACTGCCTCTTGCAACAATGCCTAAGCAAATCAACGAGATTAAGGATTTCCTTCTCACTGCCAGAAGGAAGGATGCGAGGTCAGTGAGAATCAAGAGGAGTAAGGATGTGGTTAAGTTCAAGGTCAGGTGTTCCAAGTATCTCTACACACTTTCTGTGTTTGACGTTGAGAAAGCTGACAAATTGAAGCAATCACTTCCTCCAGGTTTGAGTGTTCAAGACCTGTAG 324 0.4167 MIWFFFRRNERTTKTFRIRVYQRQQHFTLRSNSLPLATMPKQINEIKDFLLTARRKDARSVRIKRSKDVVKFKVRCSKYLYTLSVFDVEKADKLKQSLPPGLSVQDL 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00670 107 Pfam Ribosomal L38e protein family 40 106 IPR002675 GO:0003735|GO:0005840|GO:0006412
Mepo6g00670 107 Gene3D - 39 107 IPR038464 -
Mepo6g00670 107 FunFam 60S ribosomal protein L38 39 107 - -
Mepo6g00670 107 PANTHER 60S RIBOSOMAL PROTEIN L38 39 106 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00670 Mepo-Chr6 6962455 6964765 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00670 39 107 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 91.304 2.41e-41 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00670 K02923 - pda:103710002 135.961