Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00661 ATGGAACAAAAACCAGAGGCAAAGGATGAAGAAAATAAACCAAAAGTTGAAGAAAAAGTTACTTTCTACAAACTATTCAATTTTGCTGACAAACTTGACGTGATTTTGATGATCATTGGTTTCATATGTGCCGTAGCTAATGGATTATCTCAGCCTCTTATGACACTTATTTTTGGAAAACTCATCAACACCTTTGGCTCCACCGATCCATCACACATTGTCAAAGAAGTTTCTAAGGTTGCGTTATTATTTATTTACCTTGGTGTTGGATCTGGAATAGCATCATTTCTACAGGTAGCATGTTGGATGGTGACAGGAGAAAGACAAGCTGCAAGGATTCGTGGCTTGTACTTGAAAACTATATTAAAGCAAGATATTTCCTACTTTGACACTGAAGCAACCAGTGGAGAGGTTATTGGAAGAATGTCTGGTGATACCATTCTCATTCAAGATGCCATGGGAGAAAAGGCAAGTTTCTTTCTTGTTGGGAAGTTTATACAACTTATTTCATCTTTTCTTGGTGGATTTATAATCGCCTTTACAAAAGGATGGGAACTCACTCTTGTTTTGCTTGCATGCATTCCATGTATTGTCATTGTTGGTGGATTTATGTCAATGATGATGGCAAAAATGTCAAGTCGTGGACAAATTGCTTATTCAGAAGCTGGAATTGTTGTGGAACAAACAGTTGGAGCCATTAGAACAGTTGCCTCTTTTACTGGTGAGGAAAAAGCAACTGAAAAGTACAATAATAAGTTAAGAATTGCTTATAAAAGTACAGTTCAACAAGGGTTGGCCTCAGGGACAGGAATGGGATTACTTTTGCTTATTATCTTTGGCACATATGCACTTGCTATGTGGTATGGTTCCAAACTCATCATTGAGAAAGGATATGATGGTGGAAGTGTCTTCAATATAATCATAGCAATTAATACTGGTGGAATGTCCCTTGGTCAAACTACACCATGCATAAATGCATTTGCAACAGGCCAAGTAGCAGCATGTAAGATGTTCGAGACAATTAAAAGAAAACCAAACATTGATGCTTATGACACAAGTGGTGTTGTACTGGAGAATATAAAGGGAGACATTGAACTCAAAGATGTTTACTTTAGATACCCTGCAAGACCAGATGTGCAGATCTTTGCTGGATTCTCATTCTATATTCCAAGTGGCACAACTGCTGCTTTAGTAGGTCAAAGTGGTAGTGGAAAGTCAACTATAATAAGTTTATTAGAAAGATTCTATGATCCTGAAGCTGGAGAAGTGCTTATAGATGGTGTCAACTTGAAGAATTTTCAAGTTAAATGGATAAGAGAACAGATTGGACTTGTTGGTCAGGAACCTGTGTTGTTTACTGCTAGTATCAAGGATAACATTGCTTATGGGAAAGAAGGTGCAACAGATGAGGAAATAGCAACAGCAATAACACTTGCTAATGCTAAAAGATTCATTGATAAACTCCCTCAGGGTCTTGATTCAATGGTAGGAGGTCATGGGACTCAACTTTCTGGTGGACAAAAGCAAAGAATTGCAATTGCAAGGGCCATATTGAAGAATCCAAGAGTCCTTCTTCTTGATGAAGCAACAAGTGCATTGGATGCTGAGTCTGAACGTGCTGTTCAAGAAGCATTGGAAAAAGTTATGACACAAAGGACTACCGTAGTTGTTGCACATCGTTTAACAACTATCAGAAATGCTGACACCATAGCAGTGGTTCATCAGGGCAAAATTGTGGAAAAAGGTACTCATGATGAGTTAGTCAAGGATCCCTGTGGTGCTTACTCTCAGCTTATTAGTCTACAAAAAGGAGCTAAGGAAGCAGAAAGAAGCAACAGTTCAGAAGAAGATAAGTCAAGGAACAGTTTCAATTTAGATATTCAAAGAACATCCTTTGCAAGATCAATAAGCCAAAGTTCATCAGGAAGTAGACACTCTCTTTCACTTGGCCTAACTCTTCCATATCAAATTGCTGGACATGAATACGTAGAAGGAACCAATGGTGATGATGAAAGTAGTGAACTTGATAATGTGAAACGCCAAAAAGTTTCGGTTAAACGTTTGGCAAAGTTGAACAAGCCTGAGGTTCCTGTAATACTACTTGGATCCATAGCTGCAGCAGTACATGGTGTTACTCTTCCTATATTTGGCCTATTGCTTTCATCATGTATTAAATCTTTCTATAAACCCGCTGAGCAACTTAGACAAGATTCGGGGTTTTGGTCACTTTTATTTCTTGGTTTGGGTTTTATTACCTTTGTGGCTCTACCAGTGCAGAACTACTTATTTGGGATTGCTGGTGGGAAACTTATTGAAAGAATTCGTTCATTGACATTTAAAAAAGTTGTGCACCAAGAAATCAGTTGGTTTGATCATCCTTCAAATTCAAGTGGTGCCGTTAGTGCAAGGTTGGCTACTGATGCTTCAACTGTGAGAACTCTTGTTGGTGACACATTGGCCCTCATTGTGCAAAACATAGCAACAGTAGCAGCAGGACTAGTTATAGCATTTAGTGCCAATTGGATTCTATCTTTTGTGGTTCTAGCCGTGTCACCATTAATGCTCATACAAGGATACATTCAAACGAAGTTTCTAAAAGGTTTCAGTGCAGATGCAAAGGTGATGTATGAAGAGGCAAGTCAGGTTGCAAATGATGCTGTTGGTAGCATCAGAACTGTTGCATCATTTTGTGCTGAACAAAAGGTGATGGATATGTACCAGAAAAAATGTTCAGCACCAGAAAAACAAGGTATTAGGTTGGGACTTGTTAGTGGTATAGGATTCGGTTTCTCATTTTTTGCTCTATACTGCACAAATGCTTTCTGTTTCTACATAGGATCAGTTCTTATGCAACACGGCAAAGCAACTTTCGGAGAGGTTTTCAAGGTTTTCTTTTGTTTAACAATCACAGCAATAGGTGTTTCGCAGACTAGTGCTTTAGCACCAGATACTAACAAGGCCAAAGATTCTACAGCTTCAATATTTGAAATTCTAGACAGCAAACCAACCATTGACTCAAGTAGTAATGAGGGTGCGACGCTAGAAACTGTGAAAGGTGATTTTGAACTTCAAAAAGTCAGCTTTAGATACCCAACAAGGCCTAATATTCAAATTTTCAAAGATTTGTGTCTTAGCATCCCAGCTGGAAAGGTAATCATTTAA 3162 0.3846 MEQKPEAKDEENKPKVEEKVTFYKLFNFADKLDVILMIIGFICAVANGLSQPLMTLIFGKLINTFGSTDPSHIVKEVSKVALLFIYLGVGSGIASFLQVACWMVTGERQAARIRGLYLKTILKQDISYFDTEATSGEVIGRMSGDTILIQDAMGEKASFFLVGKFIQLISSFLGGFIIAFTKGWELTLVLLACIPCIVIVGGFMSMMMAKMSSRGQIAYSEAGIVVEQTVGAIRTVASFTGEEKATEKYNNKLRIAYKSTVQQGLASGTGMGLLLLIIFGTYALAMWYGSKLIIEKGYDGGSVFNIIIAINTGGMSLGQTTPCINAFATGQVAACKMFETIKRKPNIDAYDTSGVVLENIKGDIELKDVYFRYPARPDVQIFAGFSFYIPSGTTAALVGQSGSGKSTIISLLERFYDPEAGEVLIDGVNLKNFQVKWIREQIGLVGQEPVLFTASIKDNIAYGKEGATDEEIATAITLANAKRFIDKLPQGLDSMVGGHGTQLSGGQKQRIAIARAILKNPRVLLLDEATSALDAESERAVQEALEKVMTQRTTVVVAHRLTTIRNADTIAVVHQGKIVEKGTHDELVKDPCGAYSQLISLQKGAKEAERSNSSEEDKSRNSFNLDIQRTSFARSISQSSSGSRHSLSLGLTLPYQIAGHEYVEGTNGDDESSELDNVKRQKVSVKRLAKLNKPEVPVILLGSIAAAVHGVTLPIFGLLLSSCIKSFYKPAEQLRQDSGFWSLLFLGLGFITFVALPVQNYLFGIAGGKLIERIRSLTFKKVVHQEISWFDHPSNSSGAVSARLATDASTVRTLVGDTLALIVQNIATVAAGLVIAFSANWILSFVVLAVSPLMLIQGYIQTKFLKGFSADAKVMYEEASQVANDAVGSIRTVASFCAEQKVMDMYQKKCSAPEKQGIRLGLVSGIGFGFSFFALYCTNAFCFYIGSVLMQHGKATFGEVFKVFFCLTITAIGVSQTSALAPDTNKAKDSTASIFEILDSKPTIDSSSNEGATLETVKGDFELQKVSFRYPTRPNIQIFKDLCLSIPAGKVII 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00661 1053 Gene3D - 1011 1052 IPR027417 -
Mepo6g00661 1053 Gene3D - 354 603 IPR027417 -
Mepo6g00661 1053 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 700 986 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo6g00661 1053 SUPERFAMILY ABC transporter transmembrane region 682 1002 IPR036640 GO:0005524|GO:0016020
Mepo6g00661 1053 Pfam ABC transporter transmembrane region 700 971 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo6g00661 1053 Pfam ABC transporter transmembrane region 37 313 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo6g00661 1053 ProSitePatterns ABC transporters family signature. 503 517 IPR017871 GO:0005524|GO:0016887
Mepo6g00661 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 354 602 IPR027417 -
Mepo6g00661 1053 SMART AAA_5 391 577 IPR003593 GO:0016887
Mepo6g00661 1053 FunFam ABC transporter B family member 1 354 603 - -
Mepo6g00661 1053 CDD ABC_6TM_Pgp_ABCB1_D2_like 689 1004 - -
Mepo6g00661 1053 Pfam ABC transporter 385 531 IPR003439 GO:0005524
Mepo6g00661 1053 FunFam ABC transporter B family member 1 679 987 - -
Mepo6g00661 1053 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 364 600 IPR003439 GO:0005524
Mepo6g00661 1053 CDD ABC_6TM_Pgp_ABCB1_D1_like 37 337 - -
Mepo6g00661 1053 FunFam ABC transporter B family member 9 24 359 - -
Mepo6g00661 1053 Gene3D ABC transporter type 1, transmembrane domain 24 620 IPR036640 GO:0005524|GO:0016020
Mepo6g00661 1053 CDD ABC_MTABC3_MDL1_MDL2 364 602 - -
Mepo6g00661 1053 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 38 329 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo6g00661 1053 SUPERFAMILY ABC transporter transmembrane region 24 345 IPR036640 GO:0005524|GO:0016020
Mepo6g00661 1053 Gene3D ABC transporter type 1, transmembrane domain 989 1010 IPR036640 GO:0005524|GO:0016020
Mepo6g00661 1053 Gene3D ABC transporter type 1, transmembrane domain 679 988 IPR036640 GO:0005524|GO:0016020
Mepo6g00661 1053 PANTHER ABC TRANSPORTER B FAMILY 3 601 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00661 Mepo-Chr6 6834602 6840934 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00661 38 603 Calmodulin-binding Proteins AT2G36910 37.083 1.14e-114 382