Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00658 ATGTTCCAAATAGTTCTCATCGTTACCATCATCTTATCATCATCATCATCATCATCATCCCTCAACTTATCTTCCCCAATAACATCATCATCATCATCATCCCTCAACTTAACATCGCCACCATCATCATTCCTCAACCTAACCAAAATTCTTTACTCCTCTCACACTTTCTTTAAAGCAGCCTCGGAGTTTCATTTTCTCGGCATTGACAGTGAGATTGACACTCGTTATCCAACCACGGTATTTGTTCCTGATGACAAAGCATTCGCAGATGCTACTGTTTCCAAAAGATATAAGTCGCTTAGCGACGATAACAAGTATTTTGTTCTCAAATGTCATGTATTGAAGGAATATTTGCCTCCTGCTGTCCTTCGCAAAATTGCCAATGATAAGCATCTGCAAGATACGGTGGCAACCGAAATCATGGGCCAGGCTAAATATAGGATAAATATCACTGCGAAGGTTAATGGCTCCGTAGCCGTCAGCAACAACATCGTCCGAGCTCTCGTTACTCGGACTTTGTATGATCGCTCTCCAATTGCTATCTACGCCATCTCCAAGGTGTTGATGCCGAAAGAGCTTCCCGCGCCCATCACCTCTAATGTCACCGCCCCTGCGACTGTTGCCTTGGTTGGAGAAAGTGGCAGTGGAAAATCAACAATTATAAGTCTCTTAGAGAGATTTTATAACCCTGATTCTGGACATTTAATACTAGATGGAGTGAATATCAAAACTTTCAAACTAAGCTGGTTGAGACAACAAATGGGTTTGGTTGGTCAAGAGCCTATTCTTTTCAACGAAAGCATTCGTGCCAACATAGCTTATGACAAAGAAGGAGGTGCTATGGAGGATGAGATAATTGCTGCAGCTAAAGCAGCAAATGCACACAATTTCATAAGCTCTCTTCCAGATGGTTACAATACATCGGTAGGCGAAAGAGGCACACAGTTATCAGGTGGACAAAAACAACGTATAGCAATTGCAAGAGCTATATTGAAAGATCCTAGAATACTTTTACTTGATGAGGCAACAAGTGCACTTGATGATGAGTCAGAACGTGTAGTTCAAGAGGCTTTAGACAGAGTCGGTGTTAACAGAACTACTGTTGTTGGCTCTATTTATAGAGTTTTTGGGCTTGGATCTCTCGCGCCACCGTGCCATGATCGTGAAAACGATGCTTCACAATTTTCCATCATGGGACGATATGTCCCATCGTGGCATGATGCAAGCTATAAGATTTGCTTCAAATTAATTCTTCTGGCACGATGCAGTTGA 1275 0.4212 MFQIVLIVTIILSSSSSSSSLNLSSPITSSSSSSLNLTSPPSSFLNLTKILYSSHTFFKAASEFHFLGIDSEIDTRYPTTVFVPDDKAFADATVSKRYKSLSDDNKYFVLKCHVLKEYLPPAVLRKIANDKHLQDTVATEIMGQAKYRINITAKVNGSVAVSNNIVRALVTRTLYDRSPIAIYAISKVLMPKELPAPITSNVTAPATVALVGESGSGKSTIISLLERFYNPDSGHLILDGVNIKTFKLSWLRQQMGLVGQEPILFNESIRANIAYDKEGGAMEDEIIAAAKAANAHNFISSLPDGYNTSVGERGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDDESERVVQEALDRVGVNRTTVVGSIYRVFGLGSLAPPCHDRENDASQFSIMGRYVPSWHDASYKICFKLILLARCS 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00658 424 Pfam Fasciclin domain 68 191 IPR000782 -
Mepo6g00658 424 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 370 IPR027417 -
Mepo6g00658 424 Gene3D - 200 370 IPR027417 -
Mepo6g00658 424 Gene3D FAS1 domain 54 191 IPR036378 -
Mepo6g00658 424 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 180 416 IPR003439 GO:0005524
Mepo6g00658 424 ProSitePatterns ABC transporters family signature. 317 331 IPR017871 GO:0005524|GO:0016887
Mepo6g00658 424 ProSiteProfiles FAS1/BIgH3 domain profile. 44 189 IPR000782 -
Mepo6g00658 424 SMART fasc_3 80 192 IPR000782 -
Mepo6g00658 424 Pfam ABC transporter 199 345 IPR003439 GO:0005524
Mepo6g00658 424 SMART AAA_5 204 397 IPR003593 GO:0016887
Mepo6g00658 424 PANTHER ABC TRANSPORTER B FAMILY 202 370 IPR039421 -
Mepo6g00658 424 SUPERFAMILY FAS1 domain 50 192 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00658 Mepo-Chr6 6753861 6757862 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00658 201 370 Calmodulin-binding Proteins AT2G36910 65.294 3.04e-65 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00658 K05658 - gmx:100792531 275.404