Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00657 ATGGCACAGAACACTGAGGTTGATGAACATGGAAGAGACAACAAATCCAACCAGAAAGTTTCATTCCACAAACTCTTCACTTTTGCCGATAGCCTTGACGTGATATTGATGATCATTGGTACCATCTCTGCCGTTGCCAATGGAATGACACAGCCTATCATGACTCTCATTCTTGGCAAAATCATCAACACCTTTGGTTCAACAGATCCTCACCACATAGTCAAAGAAGTTTCTAAGGTTTCATTATTGTTCATTTACCTGGCTGCTGGATCTGGAATAGTATCATTCCTACAGGTATCATGTTGGATGGTGACAGGAGAAAGACAGTCTGCAAGGATTCGTAGTTTGTACTTGAAAACCATATTAAAGCAGGATATTGCATTCTTTGACACTGAAACAAATACAGGAGAAGTAATTGGTAGAATGTCTGGTGATACAATTCTCATTCAAGATGCCATGGGAGAAAAGGTTGGGAAGTTTATTCAACTTGCTGCAACATTTTTTGGTGGCTTTGCGGTTGCCTTCGTAAAAGGATGGAGACTAGCTGTAGTTTTGCTTGCATGTATACCTTGTGTTGTCATTGTTGGTGGATTCATGTCTATGTTGATGGCCAAAATGTCGTCTCGTGGACAAGCTGCTTATGCAGAAGCAGGAAATGTTGCTGATCAAACAGTAGGAGCCATCAGAACAGTTGCATCTTTTACCGGGGAGAAAAAAGCAATTGAAAATTACAATAGCAAGTTAAAAGTTGCTTATACTACAACGGTTCAACAAGGAATTGCCTCAGGCTTAGGAATGGGGACACTGTCTTTGATTGTCTTTAGCACTTATGGACTGGCCATGTGGTATGGTTCCAAATTAGTCCTTGAGAAAGGATATACCGGTGGAACTGTCATGGTTGTTATCATAGCTCTCATGACTGGTGGAATGTCATTGGGTCAGACATCACCATGCTTAGATGCATTTGCTGCAGGGCAAGCAGCAGCATATAAAATGTTTGAGACAATTAAAAGAAAGCCAAAAATTGATGCATATGACACAAGTGGTGTTGTCTTGAAAGACATAAAGGGAGATATTGAACTTAAAGATGTTTATTTCAGTTACCCTGCAAGGCCTGATGTGCAGATCTTTGCTGGTTTCTCACTGTTTGTTCCAAATGGAACAACTACTGCTTTGGTGGGTCAAAGTGGAAGTGGAAAGTCCACTGTAATCAGTTTATTGGAAAGATTCTATGACCCTGATGCTGGAGAAGTACTTATAGATGGTGTGAATTTGAAGAACTTGCAACTTAAATGGATAAGAGAACAAATTGGACTGGTTAGTCAAGAACCTATCTTGTTTACCACTACTATCAGAGAGAACATAGCATATGGGAAAGAAGGTGCAACTGATGAAGAGATAACAACAGCAATAAAACTAGCAAATGCCAAGAAATTCATTGACAAACTGCCTCAGGGTCTTGATACTATGGCAGGGCAAAATGGGACTCAACTTTCTGGTGGACAAAAGCAAAGAATTGCAATTGCAAGGGCAATATTGAAGAATCCAAGAATCCTTCTTCTTGATGAAGCAACAAGTGCATTGGATGCTGAGTCTGAACGTGTTGTTCAAGAAGCATTGGAAAAAGTTATGACACAAAGAACTACTGTAGTTGTTGCACATCGTTTAACAACTATAAGAAATGCTGACATGATAGCAGTGGTTCATCAGGGCAAAATCGTGGAAAAAGGAGCACATGATGAGTTAATCAAGGATGTCGATGGTGCATATTCTCAGCTTATTCGTCTACAAGAAGGAGAAAAAGAAAACCAAAAGTCTGAAGCAGATAATTCAAGTCACATTTTAAATAGCCAGATGTCTAGATCTTCTAACCGGAGAATTTCCTTTGTGAAATCAATGAGCCAAAGATCATCAGGGAGACACTCCCAATCAAATATATTTCCCCTTCCTCATGAAAGTGGTGTACAAACAGAAGAACCAAATATTGAAGAAGGTCAACTTGATAATAAAAAGAAACACAAAAATGTTTCTATAAGACGTTTGGCCTACCTGAACAAACCTGAGGTTCCTGTCTTACTTCTTGGATCCATTGCTGCAATAGTGAACGGTGCAGTGTTCCCTGTATTTGGCCTAGTGTTTTCATCAGCCATTACTATGTTTTATGAACCTCCAAAACAACAAAGGAAAGATGCTAGGCTCTGGTCACTTCTATATGTCGGTCTTGGTTTGGTAACTCTAGTGATTTTACCACTGCAGAATTACTTCTTCGGGATTGCAGGTGGAAAACTTGTAGAAAGAATCCGTTCATTGACATTTGCAAAAGTTGTGCACCAAGAAATAAGTTGGTTTGACGACCCTGCAAATTCAAGTGGTGCAGTAGGTGCAAGGTTATCTACCGACGCTTCAACTGTGAAAAGTCTTGTTGGTGACACATTGGCCCTCATAGTGCAAAACATATCAACAATCACAGCTGGTCTAATTCTAGCATTCACTTCCAATTGGATTCTGGCTTTTATAGTTTTGGCTGTTTCACCAGTGGTACTTATACAAGGAATTATTCAGATGCAATTTCTTAAAGGATTCAGTGGAGACGCCAAGGTGATGTATGAAGAGGCAAGTCAGGTGGCAAATGATGCTGTTGGTAGCATAAGAACTGTTGCATCATTTAATGCAGAATCAAAGGTGATGGATATGTACCAGAAGAAATGTTCAGGGCCAGAAAAACAAGGTGTTCGTTCAGGGCTTGTGAGTGGTGCAGGATTTGGTTTCTCTTTTGTCGCTTTATATTGCATGAGTGCTTTTTGTTTCTACATAGGATCTGTTCTAGTGCAGCACGGGAAAGCAACTTTTCAAGAAGTTTTCAAGGTTTTCTTTAGTTTAACTATAACAGCAGTAGGCATTTCTCAGTCTAGTACCTTGGCACCAGACACTAATAAGGCCAAAGATTCCGCAGCTTCAATATTTGAAATTCTAGACAGTAACCCTACTATTGACTCCAGTAGCAATGAAGGTGTCACATTGGAAACAGTCACAGGCGATATTGAACTTCAACATGTCAGCTTCAATTACCCAACAAGACCTCACATTCAAATTTTCAAAGATTTATGTCTATACATCCCTGCCGGAAAGACTGTTGCTTTGGTTGGAGAAAGTGGCAGTGGAAAATCAACAGTTATAAGTCTCTTGGAGAGATTTTATAATCCTAATTCTGGACATGTACTTCTAGATGGAGTGGATATAAAAACTTTCAAACTAAGCTGGTTGAGACAACAAATGGGTTTGGTTGGTCAAGAGCCTATTCTTTTCAACGAAAGCATTCGTGCTAACATAGCTTATGGCAAAGAAGGAGGTGCTACGGAGGATGAGATAATTGCAGCAGCTAAAGCAGCCAATGCACACAACTTCATAAGTTCTCTTCCAAATGGTTATGACACCTCTGTCGGGGAAAGAGGCACACAGCTATCAGGAGGACAGAAGCAGCGTATTGCTATTGCAAGAGCCATGCTGAAAAACCCCAAAATACTTTTGCTTGATGAAGCGACAAGTGCACTTGATGCCGAGTCAGAGCGTATAGTTCAAGAGGCTCTAGATAGAGTGAGTGTGAACAGAACTACTGTGGTGGTGGCTCACCGTCTTACAACAATTCGAGGGGCAGATACTATAGCCGTGATTAAAAATGGGGTGGTGGCTGAAAAGGGAAGACATGAAGTGTTGATGAAGATTACTGACGGTGTTTATGCTTCATTAGTAGCTCTTCATTCAAGTGCATCATAA 3774 0.4033 MAQNTEVDEHGRDNKSNQKVSFHKLFTFADSLDVILMIIGTISAVANGMTQPIMTLILGKIINTFGSTDPHHIVKEVSKVSLLFIYLAAGSGIVSFLQVSCWMVTGERQSARIRSLYLKTILKQDIAFFDTETNTGEVIGRMSGDTILIQDAMGEKVGKFIQLAATFFGGFAVAFVKGWRLAVVLLACIPCVVIVGGFMSMLMAKMSSRGQAAYAEAGNVADQTVGAIRTVASFTGEKKAIENYNSKLKVAYTTTVQQGIASGLGMGTLSLIVFSTYGLAMWYGSKLVLEKGYTGGTVMVVIIALMTGGMSLGQTSPCLDAFAAGQAAAYKMFETIKRKPKIDAYDTSGVVLKDIKGDIELKDVYFSYPARPDVQIFAGFSLFVPNGTTTALVGQSGSGKSTVISLLERFYDPDAGEVLIDGVNLKNLQLKWIREQIGLVSQEPILFTTTIRENIAYGKEGATDEEITTAIKLANAKKFIDKLPQGLDTMAGQNGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERVVQEALEKVMTQRTTVVVAHRLTTIRNADMIAVVHQGKIVEKGAHDELIKDVDGAYSQLIRLQEGEKENQKSEADNSSHILNSQMSRSSNRRISFVKSMSQRSSGRHSQSNIFPLPHESGVQTEEPNIEEGQLDNKKKHKNVSIRRLAYLNKPEVPVLLLGSIAAIVNGAVFPVFGLVFSSAITMFYEPPKQQRKDARLWSLLYVGLGLVTLVILPLQNYFFGIAGGKLVERIRSLTFAKVVHQEISWFDDPANSSGAVGARLSTDASTVKSLVGDTLALIVQNISTITAGLILAFTSNWILAFIVLAVSPVVLIQGIIQMQFLKGFSGDAKVMYEEASQVANDAVGSIRTVASFNAESKVMDMYQKKCSGPEKQGVRSGLVSGAGFGFSFVALYCMSAFCFYIGSVLVQHGKATFQEVFKVFFSLTITAVGISQSSTLAPDTNKAKDSAASIFEILDSNPTIDSSSNEGVTLETVTGDIELQHVSFNYPTRPHIQIFKDLCLYIPAGKTVALVGESGSGKSTVISLLERFYNPNSGHVLLDGVDIKTFKLSWLRQQMGLVGQEPILFNESIRANIAYGKEGGATEDEIIAAAKAANAHNFISSLPNGYDTSVGERGTQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAESERIVQEALDRVSVNRTTVVVAHRLTTIRGADTIAVIKNGVVAEKGRHEVLMKITDGVYASLVALHSSAS 1257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00657 1257 CDD ABC_MTABC3_MDL1_MDL2 1014 1250 - -
Mepo6g00657 1257 FunFam ABC transporter B family member 1 349 598 - -
Mepo6g00657 1257 FunFam ABC transporter B family member 1 1004 1254 - -
Mepo6g00657 1257 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 359 595 IPR003439 GO:0005524
Mepo6g00657 1257 MobiDBLite consensus disorder prediction 609 651 - -
Mepo6g00657 1257 FunFam ABC transporter B family member 9 24 354 - -
Mepo6g00657 1257 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 693 979 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo6g00657 1257 CDD ABC_MTABC3_MDL1_MDL2 359 597 - -
Mepo6g00657 1257 Pfam ABC transporter 1033 1182 IPR003439 GO:0005524
Mepo6g00657 1257 Gene3D ABC transporter type 1, transmembrane domain 672 980 IPR036640 GO:0005524|GO:0016020
Mepo6g00657 1257 Gene3D ABC transporter type 1, transmembrane domain 981 1003 IPR036640 GO:0005524|GO:0016020
Mepo6g00657 1257 Gene3D - 1004 1254 IPR027417 -
Mepo6g00657 1257 Gene3D - 349 598 IPR027417 -
Mepo6g00657 1257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 349 597 IPR027417 -
Mepo6g00657 1257 ProSitePatterns ABC transporters family signature. 498 512 IPR017871 GO:0005524|GO:0016887
Mepo6g00657 1257 Pfam ABC transporter transmembrane region 37 309 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo6g00657 1257 Pfam ABC transporter transmembrane region 693 965 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo6g00657 1257 Gene3D ABC transporter type 1, transmembrane domain 24 608 IPR036640 GO:0005524|GO:0016020
Mepo6g00657 1257 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1014 1251 IPR003439 GO:0005524
Mepo6g00657 1257 SUPERFAMILY ABC transporter transmembrane region 674 995 IPR036640 GO:0005524|GO:0016020
Mepo6g00657 1257 CDD ABC_6TM_Pgp_ABCB1_D2_like 682 997 - -
Mepo6g00657 1257 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 38 324 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo6g00657 1257 SUPERFAMILY ABC transporter transmembrane region 24 343 IPR036640 GO:0005524|GO:0016020
Mepo6g00657 1257 Pfam ABC transporter 380 526 IPR003439 GO:0005524
Mepo6g00657 1257 FunFam ABC transporter B family member 1 672 980 - -
Mepo6g00657 1257 ProSitePatterns ABC transporters family signature. 1154 1168 IPR017871 GO:0005524|GO:0016887
Mepo6g00657 1257 PANTHER ABC TRANSPORTER B FAMILY 8 598 IPR039421 -
Mepo6g00657 1257 MobiDBLite consensus disorder prediction 598 669 - -
Mepo6g00657 1257 SMART AAA_5 1041 1228 IPR003593 GO:0016887
Mepo6g00657 1257 SMART AAA_5 386 572 IPR003593 GO:0016887
Mepo6g00657 1257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1003 1251 IPR027417 -
Mepo6g00657 1257 CDD ABC_6TM_Pgp_ABCB1_D1_like 37 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00657 Mepo-Chr6 6744593 6750568 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00657 20 1253 Calmodulin-binding Proteins AT2G36910 45.659 0.0 1077
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00657 K05658 - gmx:100801771 1971.44