Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00628 ATGGCAACAAGAAAAAGCAAAGCCATAGGCATTGACCTTGGTACAAGCTACAGCTGCATTGCAGTGTGGCGAAACAATCGTGTTGAGATCATTCCAAACGACCAAGGGAACCGTGTCACCCCTTCTTACGTTGCCTTCACCGACACTGAAAGATTAATAGTCCAACAAGACATGAAGCTTTGGCCTTTTAAGGTTGTTCCAAACCACAAAGACAAACCCATGATTGTTGTCAATTACAAAGGCCAAGAGAAACATTTTTCACCTCAAGAGATATCTTCCATGGTGTTGTCTAAGTTAAAGGAAATTGCTGAAACTTATTTGGGTCATGAAGTGAACAATGCCGTTATCACTGTTCCTGCTTACTTCAACAACTCACAGAGACAAGCTACAAAAGACGCAGGGATAATTGCGGGTTTTAATGTGATGAGGATCATCAACGAGCCTACTGCGGCTGCTATTGCTTATGGTTTTGACAAGAAAATGTGGACACAAGGTGAGAAGAATGTGCTTGTGTTTGATCTTGGTGGTGGAACATTCGATGTTTGCTTAGTGACCATTGATGAAGGAATGTTCCAGGTTAAGGCCACATTGGGAGATACTCATTTGGGAGGTATTGATTTCGATAACAATTTGGTGAACCGTCTTGTTGAATTATTTCATAGAAAGTACAAGAAGGATTTGAAGATCAGTGAGAATTCCAAAGCTTTGGGGAGATTAAGATCAGCATGTGAGAAAGCAAAGAGGTTACTTTCTTCATCTTCACAGACAGTTATTGAGCTTGATTCACTATGTGGAGGGATTGATCTACATTTCACTGTTACTAGAGCTTTTTTTGAGGAAATAAACAAGGATTTGTTCAAAAAGTGCATGGAAACTGTGGAGAAGTGTTTGGTTGAGGTAAAAATTAGTAAAAGCCAAGTTCATGAGTTTGTTCTTGTAGGAGGGTCTACTAGAATTCCTAAGATTCAACAACTATTGAAGGAAATGTTTAGAGTAAACGGCAAAGTCAAAGAGCCTTGCAAAAGCATTAATCCTGATGAAGCTGTGGCTTATGGCGCCGCAGTTCAAGCAGCAATATTGAATACTGAAGGAGACAAGAAAATTGAAGACTTGTTACTGTTGGATGTTATGCCTTTTAGTCTTGGTGTTGAAACTAATGGTGGTGTCATGTCTGTTTTGATTCCAAAGAATACCATGATCCCTACGAAAAGGGAGAATATTTTCTCTATAGGCTCTGATAATCAAGATAGTGTTTTGATCAAAGTCTATGAAGGAGAACATGCTAAGACCGAGGATAACTTTTTGCTTGGTAAATTTGAGCTCTCAGGGTGCTCTTTAGTACCAAGAAAGGTTCCAAATATCAATGTTTGTTTTGATGTTGATGTTAATGGAATTTTGGAGGTTACTGCTGAAGATAAGACGCAAGGGTTGAAAAAGAAGATCACTATCACCAACAAGGAGGGAAGGTTGAGTCCTGAAGAGATGAGAAGAATGATGAGGGATGCCGAGCGGTATAAGGCAGAGGATGAGGAGGTTAGGAAGAAGGTGAAAGCAAAGAACTTGTTTGAGAATTATGTTTTTGAAATGAGGGTGAGAGTGAAGAAGCTTGAGAAGGTAGTGGAGGAAAGTATAGAATGGCTTGACAGAAACCAATTGGCAGAAATTGATGAGTTTGAATTCAAGAAGCAGGAGTTGGAAAATAGTATGAAGTTTCTCTAA 1719 0.3944 MATRKSKAIGIDLGTSYSCIAVWRNNRVEIIPNDQGNRVTPSYVAFTDTERLIVQQDMKLWPFKVVPNHKDKPMIVVNYKGQEKHFSPQEISSMVLSKLKEIAETYLGHEVNNAVITVPAYFNNSQRQATKDAGIIAGFNVMRIINEPTAAAIAYGFDKKMWTQGEKNVLVFDLGGGTFDVCLVTIDEGMFQVKATLGDTHLGGIDFDNNLVNRLVELFHRKYKKDLKISENSKALGRLRSACEKAKRLLSSSSQTVIELDSLCGGIDLHFTVTRAFFEEINKDLFKKCMETVEKCLVEVKISKSQVHEFVLVGGSTRIPKIQQLLKEMFRVNGKVKEPCKSINPDEAVAYGAAVQAAILNTEGDKKIEDLLLLDVMPFSLGVETNGGVMSVLIPKNTMIPTKRENIFSIGSDNQDSVLIKVYEGEHAKTEDNFLLGKFELSGCSLVPRKVPNINVCFDVDVNGILEVTAEDKTQGLKKKITITNKEGRLSPEEMRRMMRDAERYKAEDEEVRKKVKAKNLFENYVFEMRVRVKKLEKVVEESIEWLDRNQLAEIDEFEFKKQELENSMKFL 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00628 572 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 365 518 IPR029047 -
Mepo6g00628 572 Coils Coil 495 515 - -
Mepo6g00628 572 ProSitePatterns Heat shock hsp70 proteins family signature 1. 11 18 IPR018181 -
Mepo6g00628 572 FunFam Heat shock 70 kDa 203 288 - -
Mepo6g00628 572 Pfam Hsp70 protein 54 569 IPR013126 GO:0005524|GO:0140662
Mepo6g00628 572 Pfam Hsp70 protein 8 53 IPR013126 GO:0005524|GO:0140662
Mepo6g00628 572 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 367 523 IPR029047 -
Mepo6g00628 572 Gene3D - 95 358 - -
Mepo6g00628 572 FunFam Heat shock 70 kDa 365 519 - -
Mepo6g00628 572 SUPERFAMILY Actin-like ATPase domain 166 360 IPR043129 -
Mepo6g00628 572 PRINTS 70kDa heat shock protein signature 177 187 - -
Mepo6g00628 572 PRINTS 70kDa heat shock protein signature 7 20 - -
Mepo6g00628 572 PRINTS 70kDa heat shock protein signature 35 47 - -
Mepo6g00628 572 PRINTS 70kDa heat shock protein signature 370 389 - -
Mepo6g00628 572 PRINTS 70kDa heat shock protein signature 451 467 - -
Mepo6g00628 572 PRINTS 70kDa heat shock protein signature 114 134 - -
Mepo6g00628 572 PRINTS 70kDa heat shock protein signature 343 363 - -
Mepo6g00628 572 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 518 569 IPR029048 -
Mepo6g00628 572 Gene3D - 160 340 - -
Mepo6g00628 572 Gene3D - 54 94 - -
Mepo6g00628 572 Gene3D - 1 53 - -
Mepo6g00628 572 PANTHER HEAT SHOCK PROTEIN 70KDA 8 541 IPR013126 GO:0005524|GO:0140662
Mepo6g00628 572 SUPERFAMILY Actin-like ATPase domain 6 159 IPR043129 -
Mepo6g00628 572 Gene3D - 519 570 IPR029048 -
Mepo6g00628 572 FunFam heat shock 70 kDa protein-like 45 94 - -
Mepo6g00628 572 Gene3D Actin; Chain A, domain 4 203 288 - -
Mepo6g00628 572 FunFam heat shock 70 kDa protein-like 2 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00628 Mepo-Chr6 6410170 6411979 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00628 1 566 Calmodulin-binding Proteins AT1G16030 63.666 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00628 K03283 - gmx:100788531 852.047