Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00624 ATGGCTGATAATCCAGAAAGCAATGAAATTCATCATGAGGTAGTTTTAGATGTAAACAGTGATACCTCAAAAAACAATGAAGAGTCGGGCATCAAAGACTCTGTACCCCTTCTCAAGAAGTTGGTAGCAGAAGTGGTGGGAACATACATGATGATATTTGCAGGTTGTGCTGCTGTTATTGTGAATCTCAACAATGATCATGTAGTAACACTTCCTGGAATTGCATTTACTTGGGGATTCACTGTTATGGTTTTGATTTACTCTGTTGGTCACATTTCTGGTGCTCACTTCAACCCCGCTGTGACCATTGCTTTTGCTTCTACTAGAAGATTTCCCTTCAAGCAGGTACCAGCTTATATTATAGCTCAGGTCCTTGGATCCACATTAGCAAGTGGAACCCTCAGACTTATATTTAATGGTGAAGATGATCATTTCATTGGAACACTTCCAGCTGGTTCTAATTTGCAAGCTTTTGTAATCGAGTTCATATGCACTTTCTTCCTTATGTTTGTTGTTACTGCAGTAGCCACTGATAACAGAGCGATTGGTGAATTAGCCGGACTTGCGATTGGGTCTACAATAATAATAGATATATTGTTTGCGGGACCAATGACAGGAGCATCGATGAATCCAGCAAGGAGTTTAGGACCTGCTTTTTTATACCATAAATATAAAGGATTATGGATATATTTGATTGCACCAATTCTAGGAGCTTTGGTAGGTGCATGGACTTACAATTTCATCAGGCACACAAACAAGCCAACGTGCGATGAGCTCCCTAAGATTGAGCTCACCAAGGTTGTCCCTTTCCTTAGGAGGAGCAGGTCGTAG 831 0.4079 MADNPESNEIHHEVVLDVNSDTSKNNEESGIKDSVPLLKKLVAEVVGTYMMIFAGCAAVIVNLNNDHVVTLPGIAFTWGFTVMVLIYSVGHISGAHFNPAVTIAFASTRRFPFKQVPAYIIAQVLGSTLASGTLRLIFNGEDDHFIGTLPAGSNLQAFVIEFICTFFLMFVVTAVATDNRAIGELAGLAIGSTIIIDILFAGPMTGASMNPARSLGPAFLYHKYKGLWIYLIAPILGALVGAWTYNFIRHTNKPTCDELPKIELTKVVPFLRRSRS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00624 276 PANTHER AQUAPORIN NIP2-1 24 258 IPR034294 -
Mepo6g00624 276 CDD MIP 39 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00624 276 Pfam Major intrinsic protein 34 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00624 276 MobiDBLite consensus disorder prediction 1 18 - -
Mepo6g00624 276 ProSitePatterns MIP family signature. 96 104 IPR022357 -
Mepo6g00624 276 PRINTS Major intrinsic protein family signature 115 134 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00624 276 PRINTS Major intrinsic protein family signature 191 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00624 276 PRINTS Major intrinsic protein family signature 78 102 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00624 276 PRINTS Major intrinsic protein family signature 228 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00624 276 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00624 276 PRINTS Major intrinsic protein family signature 160 178 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00624 276 MobiDBLite consensus disorder prediction 1 30 - -
Mepo6g00624 276 SUPERFAMILY Aquaporin-like 35 256 IPR023271 -
Mepo6g00624 276 Gene3D Glycerol uptake facilitator protein. 2 259 IPR023271 -
Mepo6g00624 276 NCBIfam MIP family channel protein 43 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00624 Mepo-Chr6 6388201 6390771 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00624 8 272 Major Intrinsic Protein MIP AT5G37820 52.399 2.26e-94 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00624 K09874 - gmx:100812577 386.726