Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00623 ATGGCTTTTGAGCCGTTGGTTTGGTATTGTAAACCGGTTGAAAATGGAGTGTGGACAAGAACAGTTCAGAATGCCTTTGGCGCTTACACTCCTTGTGCAGTCGACTCTTTGGTCATTGGTGTTTCTCATTTGCTGATTCTAGGCTTGTGCATCTACCGCATATGGTTGATTAAGAAGGATTTCACAGTAAAGTGGTTTCGTTTAAGGTCAAATATCAACAATTATGTTTTGGGGGTTTTGGCTGCATATTCTGTGGCAAAGCCTTTATACAGATTGGTCATGCGAGCAGAAAGAGAAACATTGTCAAACATAAATTTGGATATTCCTGTTGGTAGTCTAGTTGCTGTTGTTGGCGGCACAGGAGAAGGAAAGACGTCGCTCATATCTGCAATGCTTGGAGAACTTCCTCCAATTGTGGATTCAACTGTTGTTATGAGAGGAACAGTCGCTTATGTACCTCAAGTTTCATGGATTTTTAATGCAGCTGTACGGGATAACATTTTGTTTGGTTCTGTCTTTGATCCAATAAGATATAAAAGGGCAATCGATGTGACTGAACTGCGACACGACCTTGATTTACTACCTGGCGGTGATCTTGCTGAAATTGGTGAAAGAGGGGTAAACATCAGTGGTGGTCAGAAGCAAAGAGTATCCATGGCTAGAGCTGTCTACTCCAATTCTGATGTGCTCATCTTTGATGACCCCCTAAGTGCTCTGGATGCACATGTGGCTAGACGGGTTTTTGATAAATGTATCAGAGGAGAATTACGAGGGAAGACCCGAGTTCTTGTTACAAATCAGCTCCATTTCCTTTCACAAGTTGATAGAATCATTTTGGTCCATGAAGTGGTCAATGAACCAGTTAATGATATTGCAAAGAGTGAAAGTAAACCAAAAGTAGGAAAATCTATCCTTATTAAACAGGAAGAACGGGAAACAGGTGTTGTCAGTTTGAATGTTCTAATGAGGTACAAAAATGCATTAGGAGGCACTTGGGTTGTTGTAGTACTATTTGGATGCTATTTCTTAACTGAAGTGTTACGAGTTTCAAGTAGCACATGGTTGAGCCACTGGACTGATCAGAGTGCGGTAGAGGGTTATAATCCCGGCTTCTACAATCTCATATATGCAGCTCTATCATTTGGTCAGGTTTTGACGACTCTAGCAAATTCTTACTGGCTAATCATATCAAGTCTTTATGCTGCCAGAAAATTGCACGAAGCTATGCTTCAGTCCATCTTACGAGCTCCCATGGTCTTTTTCCATACAAATCCACTCGGAAGGGTCATCAATAGGTTTGCAAAAGATCTAGGTGACATCAATCGCAATGTGGCTCCATTTAGCACTGCTCATGAAGTACAGCGATTGGATTCAATTAGCAGATCTCCTGTTTATGCACAATTTGGGGAAGCTCTAAATGGTCTATCAACTATTCGTGCTTACATAGCCTATGATCGAATGGCTGATATAAACGGAAGATCCATGGACAACAACATTCGGTTCACACTGGTGAACAATAGTGGAAACCGGTGGCTTGCAATCCGATTGGAAACCCTAGGAGGTCTCATGATATGGTTCACGGCAACCTTCGCTGTGATGCAGAACAGTAGGGCAGAGAACCAGCAAGAATTTGCATCCACCATGGGATTACTTCTCAGTTACGCTTTGAATATTACAACCTTGCTCACCACTGTGCTTAGACTTGCATGCTCCATCAAATTCGAAGAAGTTGTTCTTCGCTACAGGCCAGAACTTCCTCCTGTGCTTCATGGCCTATCTTTCACAATTTTTCCAAGCGATAAGGTTGGCATCGTTGGTAGGACTGGCGCGGGAAAATCCAGCATGTTAAATGCCCTATTTCGAATCGTGGAATTGGAAAAAGGGAGAATATTAATTGATGATCGTGATATTTCAAAGTTTGGGCTGGCTGATTTGCGGAAAGTTCTTGGCATTATACCACAATCTCCTGTTCTCTTTTCGGGAACTGTGAGATTTAATCTTGATCCATTTACTGAACACAATGATGCTGACCTCTGGGAGTCTCTGGAGAGGGCACATTTGAAGGATGTGATAAGGAGGAATTTTTTGGGGCTGGATGCTGAGGTATCTGAGGCAGGTGAGAACTTCAGTGTTGGACAGAGGCAACTTTTGAGTCTTGCCAGGGCTTTGTTGCGAAGATCGAAGAACGACCTACAGCAATTGAAAATAGAAGATGAGAATAGTATTCTCAAGAAGACAAAGGATGCTCTGATTACTCTGCAGGGTGTTCTGGAAAGGAAACATGATAAAGAAATTGAGGAATCTTTAAACCAACACCAAATATCCTCCGAGGGATGGTGGTCATCCCTTTACAAGATGATTGAAGGTCTTGCTATGATGAGCGGATTGGCCAAGAACAGGCTCCATCAATCAGATTTCGGTTTTGAGGACATGTCGATTAACTTTGATCAAATTGATATTCATCAAAATGTTGTTACCTTAGATGTCCATGCTGCCAAAGATCTATTACATTCATCTGGTTACAATTATCTTGATGTGAGGTCAGTTGAGGAATTCAATAAAAGCCATGTTGAGAATGCTATTAATGTCCCCTATATGTTCAAAACAGAAGCAGGACGGGTGAAAAATCCTGATTTTGTTAATCAAGTTGCAGCAATATGTAAGAGTGAGGATCACTTAGTTGTGGCTTGCAATAGTGGTGGAAGATCAAGTCAAGCCTGCGTTGATCTCCATAATTCAGGATTTCAACATATTGTTAACATGGGGGGAGGCTATTCTGCGTGGGTGGACGCTGGATTTGCAGGTGATTACAAGCCTGCAGACGAGCTCAAAACTGCTTGCAAGTTCCGTCCATAA 2856 0.4205 MAFEPLVWYCKPVENGVWTRTVQNAFGAYTPCAVDSLVIGVSHLLILGLCIYRIWLIKKDFTVKWFRLRSNINNYVLGVLAAYSVAKPLYRLVMRAERETLSNINLDIPVGSLVAVVGGTGEGKTSLISAMLGELPPIVDSTVVMRGTVAYVPQVSWIFNAAVRDNILFGSVFDPIRYKRAIDVTELRHDLDLLPGGDLAEIGERGVNISGGQKQRVSMARAVYSNSDVLIFDDPLSALDAHVARRVFDKCIRGELRGKTRVLVTNQLHFLSQVDRIILVHEVVNEPVNDIAKSESKPKVGKSILIKQEERETGVVSLNVLMRYKNALGGTWVVVVLFGCYFLTEVLRVSSSTWLSHWTDQSAVEGYNPGFYNLIYAALSFGQVLTTLANSYWLIISSLYAARKLHEAMLQSILRAPMVFFHTNPLGRVINRFAKDLGDINRNVAPFSTAHEVQRLDSISRSPVYAQFGEALNGLSTIRAYIAYDRMADINGRSMDNNIRFTLVNNSGNRWLAIRLETLGGLMIWFTATFAVMQNSRAENQQEFASTMGLLLSYALNITTLLTTVLRLACSIKFEEVVLRYRPELPPVLHGLSFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELEKGRILIDDRDISKFGLADLRKVLGIIPQSPVLFSGTVRFNLDPFTEHNDADLWESLERAHLKDVIRRNFLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKNDLQQLKIEDENSILKKTKDALITLQGVLERKHDKEIEESLNQHQISSEGWWSSLYKMIEGLAMMSGLAKNRLHQSDFGFEDMSINFDQIDIHQNVVTLDVHAAKDLLHSSGYNYLDVRSVEEFNKSHVENAINVPYMFKTEAGRVKNPDFVNQVAAICKSEDHLVVACNSGGRSSQACVDLHNSGFQHIVNMGGGYSAWVDAGFAGDYKPADELKTACKFRP 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00623 951 ProSitePatterns ABC transporters family signature. 709 723 IPR017871 GO:0005524|GO:0016887
Mepo6g00623 951 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 57 444 - -
Mepo6g00623 951 Pfam ABC transporter 101 236 IPR003439 GO:0005524
Mepo6g00623 951 Gene3D - 86 311 IPR027417 -
Mepo6g00623 951 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 335 445 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo6g00623 951 ProSiteProfiles Rhodanese domain profile. 837 937 IPR001763 -
Mepo6g00623 951 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 281 IPR027417 -
Mepo6g00623 951 FunFam Multidrug resistance-associated protein 1 87 304 - -
Mepo6g00623 951 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 822 933 IPR036873 -
Mepo6g00623 951 SMART AAA_5 598 737 IPR003593 GO:0016887
Mepo6g00623 951 SMART AAA_5 110 310 IPR003593 GO:0016887
Mepo6g00623 951 Gene3D - 570 740 IPR027417 -
Mepo6g00623 951 Gene3D ABC transporter type 1, transmembrane domain 324 447 IPR036640 GO:0005524|GO:0016020
Mepo6g00623 951 Coils Coil 717 737 - -
Mepo6g00623 951 Gene3D - 814 934 IPR036873 -
Mepo6g00623 951 SMART rhod_4 827 934 IPR001763 -
Mepo6g00623 951 SUPERFAMILY ABC transporter transmembrane region 331 721 IPR036640 GO:0005524|GO:0016020
Mepo6g00623 951 Pfam Rhodanese-like domain 831 930 IPR001763 -
Mepo6g00623 951 CDD RHOD 832 929 - -
Mepo6g00623 951 CDD ABCC_MRP_domain1 100 282 - -
Mepo6g00623 951 ProSitePatterns ABC transporters family signature. 209 223 IPR017871 GO:0005524|GO:0016887
Mepo6g00623 951 FunFam Multidrug resistance-associated protein member 4 565 754 - -
Mepo6g00623 951 Pfam ABC transporter transmembrane region 336 441 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo6g00623 951 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 572 813 IPR003439 GO:0005524
Mepo6g00623 951 CDD ABC_6TM_ABCC_D2 334 558 IPR044726 GO:0140359
Mepo6g00623 951 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 566 728 IPR027417 -
Mepo6g00623 951 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 80 307 IPR003439 GO:0005524
Mepo6g00623 951 Pfam ABC transporter 589 728 IPR003439 GO:0005524
Mepo6g00623 951 Gene3D ABC transporter type 1, transmembrane domain 448 569 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00623 Mepo-Chr6 6375436 6385317 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00623 822 933 Sulfurtransferasese or Rhodanese AT5G66170 46.491 7.58e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00623 - - gmx:100801762 1038.48