Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00621 ATGGGCTATAGGAATGGAAATCTTGATGTGGTTATGAATGTAAACGATGATGCTACCAAAAAATGTGACGACACAAGCATTGATGATCATGTTCCTCTTTTGCAAAAGTTGGTAGCAGAAGTGGTGGGAACATTCTTCTTGATATTTGCTGGATGTGGTTCTGTGATGGTGAACCTTAACAATGATAATGTGGTGACACTTCCTGGAATTGCAATTGTTTGGGGACTTGTTGTTATGGTATTAGTTTATTCTATTGGTCATATCTCTGGTGCCCATTTCAATCCCGTTGTCACCATTGCTCACACTACCACCGGAAGGTTTCCATTGAAGCAGGTACCAGCTTATATAATTGCTCAGGTCGTTGGCTCAACACTTGCAAGTGGAGCTCTCAAACTTATATTCAGTGGCAAGGAAAATCAATTTGCAGGAACACTTCCAGCTGGTTCTGACCTTCAAGCTTTTGTGGTTGAATTTATCATCACTTTCTACCTTATGTTCGTCATTTCTGGAGTTGCCACTGATAATAGAGCGATTGGTGAATTGGCTGGACTTGCAGTTGGATCTACAGTCATGCTAAATGTGTTGTTTGCGGGACCCATCACAGGAGCATCAATGAATCCAGCAAGAAGCTTAGGGCCTGCTATTGTGCACCATCAATATAGAGGAATATGGATATATATTGTGTCACCAATTCTTGGAGCTTTGGCTGGTACATGGGCATACACTTTCCTCAGAATCACTAACAAGCCAGTACGTGAGCTCACCAAGAGTTCTTCATTCCTCAAAGGTTCAGGAAGCAAGGGAGCTGAGTGA 813 0.4231 MGYRNGNLDVVMNVNDDATKKCDDTSIDDHVPLLQKLVAEVVGTFFLIFAGCGSVMVNLNNDNVVTLPGIAIVWGLVVMVLVYSIGHISGAHFNPVVTIAHTTTGRFPLKQVPAYIIAQVVGSTLASGALKLIFSGKENQFAGTLPAGSDLQAFVVEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVMLNVLFAGPITGASMNPARSLGPAIVHHQYRGIWIYIVSPILGALAGTWAYTFLRITNKPVRELTKSSSFLKGSGSKGAE 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00621 270 PANTHER AQUAPORIN NIP2-1 27 261 IPR034294 -
Mepo6g00621 270 Pfam Major intrinsic protein 30 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00621 270 CDD MIP 35 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00621 270 PRINTS Major intrinsic protein family signature 156 174 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00621 270 PRINTS Major intrinsic protein family signature 187 209 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00621 270 PRINTS Major intrinsic protein family signature 111 130 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00621 270 PRINTS Major intrinsic protein family signature 35 54 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00621 270 PRINTS Major intrinsic protein family signature 74 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00621 270 PRINTS Major intrinsic protein family signature 224 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00621 270 SUPERFAMILY Aquaporin-like 30 255 IPR023271 -
Mepo6g00621 270 NCBIfam MIP family channel protein 39 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00621 270 Gene3D Glycerol uptake facilitator protein. 6 257 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00621 Mepo-Chr6 6366226 6368093 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00621 19 267 Major Intrinsic Protein MIP AT5G37820 59.036 5.27e-100 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00621 K09874 - gmx:100812577 436.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04056 2 49569202 49571947 Mepo6g00621 6 6366226 6368093 PCT