Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00620 ATGGCTGATCATTCATCAAGCAATGGAAACTATGAAATGTTTTTGAATGTAAATGGTGATGCCTCCCAAAATTGTGACGACTCATGCATCCAAGACTATGTGCCCCTTTTGCAGAAGTTGGTAGCAGAGGTGGTGGGGACGTATTTCTTGATATTTGCAGGGTGTGCTGCTGTTGTGGTGAACCTTGACAACGAAAAAGTGGTAACACATCCTGGGATCTCAATTGTTTGGGGCCTCACTGTTATGGTTTTGGTTTACTCTGTTGGTCACATCTCTGGTGCTCATTTCAATCCTGATGTAACCATTGCTCATGCTTCAACCAAAAGGTTCCCCGTTAAACAGGTACCGGCTTATATAATATCACAAGTTCTTGGATCAACCCTTGCAAGTGGAACACTTAGGCTTATATTCAATGGCAAGGAAAACCATTTTTCAGGAACACTTCCAGCTGGTTCTGATCTCCAGGCATTTGTGGTTGAATTCATAATCACTTTTTATCTTATGTTCGTCATTTCTGGAGTGGCCACCGATGATAGAGCGATTTTATTATTGGGTTTTTCTACCATGTGCAAATTTGGTGAGTTAGACAAACCCTTATTTTATTTGTCAATACCGCAATATGGTGAGTTAGCTGGACTTGCAGTTGGATCTATTGTGCTTCTAAATGTTATGTTTGCCGGGCCAATTACTGGAGCATCAATGAATCCTGCAAGGAGTTTAGGACCTGCTATTGTTCATAAAGAGTATAGAGGAATATGGATATATTTGGTATCAACAACTCTTGGTGCCATAGCTGGTACATGGGCATATACTTTCATCCGGTACACAAACAAGCCAGTACGTGAAATTAGTAAGAGTGCCTCTTTCCTTAAAGGAGTAGGAAATGGTGGTGCTAAGTGA 900 0.4111 MADHSSSNGNYEMFLNVNGDASQNCDDSCIQDYVPLLQKLVAEVVGTYFLIFAGCAAVVVNLDNEKVVTHPGISIVWGLTVMVLVYSVGHISGAHFNPDVTIAHASTKRFPVKQVPAYIISQVLGSTLASGTLRLIFNGKENHFSGTLPAGSDLQAFVVEFIITFYLMFVISGVATDDRAILLLGFSTMCKFGELDKPLFYLSIPQYGELAGLAVGSIVLLNVMFAGPITGASMNPARSLGPAIVHKEYRGIWIYLVSTTLGAIAGTWAYTFIRYTNKPVREISKSASFLKGVGNGGAK 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00620 299 Pfam Major intrinsic protein 35 180 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00620 299 Pfam Major intrinsic protein 207 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00620 299 CDD MIP 38 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00620 299 Gene3D Glycerol uptake facilitator protein. 16 286 IPR023271 -
Mepo6g00620 299 PANTHER AQUAPORIN NIP2-1 24 289 IPR034294 -
Mepo6g00620 299 SUPERFAMILY Aquaporin-like 34 282 IPR023271 -
Mepo6g00620 299 PRINTS Major intrinsic protein family signature 114 133 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00620 299 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00620 299 PRINTS Major intrinsic protein family signature 216 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00620 299 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00620 299 PRINTS Major intrinsic protein family signature 77 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00620 299 PRINTS Major intrinsic protein family signature 253 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00620 Mepo-Chr6 6360180 6362851 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00620 24 295 Major Intrinsic Protein MIP AT5G37820 52.669 2.30e-92 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00620 K09874 - gmx:100786924 447.973