Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00619 ATGGGTGATATTTCAGCTAGCAATGGAAATCTTGATGTGGTTATGAATGTAAACGATGGTGCAGCAAAAAAATGTGACGACACAAGCATTGATGATCATGTTCCTCTTTTGCAAAAGTTGGTAGCAGAAGTGGTGGGAACATTCTTCTTGATATTTGCGGGATGTGCTGCTGTGGTGGTGAACCTTAACAATGATAAAGTAGTGACACTTCCTGGAATTTCAATTGTTTGGGGACTTGCTGTTATGGTATTAGTTTATTCTATTGGTCATATCTCTGGTGCTCATTTCAATCCCGCTGTCACCATTGCTCACACTACCACCGGAAGGTTTCCATTGAAGCAGGTACCAGCTTATATAATTGCTCAGGTCGTTGGCTCAACACTTGCAAGTGGAGTTCTCAAACTTATATTCAATGGCAAGGAAAATCAATTTGCAGGAACACTTCCTGCTGGTTCTGATCTTCAAGCTTTTGTGGTTGAATTTATTATCACTTTCTTCCTTATGTTCATCATTTCTGGAGTTGCCACTGATAATAGAGCGATTGGTGAATTGGCTGGACTTGCAGTTGGATCTACGGTTATACTGAATGTGCTGTTTGCGGGGCCCATCACAGGAGCATCAATGAACCCAGCAAGAAGCTTAGGGCCAGCTATTGTGCACCATGAATATAAAGGCATATGGATATATATGGTGTCACCTATTCTAGGAGCTTTGGCTGGTACATGGACCTACACTTTCCTCAGAATCACAAATAAGCCAGTGCGTGAGCTCACCAAGAGTTCTTCATTCCTCAAAGGTGCAGGAAGCAAGGGAGCTGAGTGA 822 0.4258 MGDISASNGNLDVVMNVNDGAAKKCDDTSIDDHVPLLQKLVAEVVGTFFLIFAGCAAVVVNLNNDKVVTLPGISIVWGLAVMVLVYSIGHISGAHFNPAVTIAHTTTGRFPLKQVPAYIIAQVVGSTLASGVLKLIFNGKENQFAGTLPAGSDLQAFVVEFIITFFLMFIISGVATDNRAIGELAGLAVGSTVILNVLFAGPITGASMNPARSLGPAIVHHEYKGIWIYMVSPILGALAGTWTYTFLRITNKPVRELTKSSSFLKGAGSKGAE 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00619 273 PANTHER AQUAPORIN NIP2-1 30 263 IPR034294 -
Mepo6g00619 273 Pfam Major intrinsic protein 33 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00619 273 NCBIfam MIP family channel protein 42 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00619 273 Gene3D Glycerol uptake facilitator protein. 8 260 IPR023271 -
Mepo6g00619 273 PRINTS Major intrinsic protein family signature 227 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00619 273 PRINTS Major intrinsic protein family signature 190 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00619 273 PRINTS Major intrinsic protein family signature 77 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00619 273 PRINTS Major intrinsic protein family signature 114 133 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00619 273 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00619 273 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00619 273 ProSitePatterns MIP family signature. 95 103 IPR022357 -
Mepo6g00619 273 SUPERFAMILY Aquaporin-like 33 258 IPR023271 -
Mepo6g00619 273 CDD MIP 38 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00619 Mepo-Chr6 6353499 6355636 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00619 25 270 Major Intrinsic Protein MIP AT5G37820 60.163 3.43e-101 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00619 K09874 - gmx:100812577 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00619 6 6353499 6355636 Mepo6g00619 6 6353499 6355636 ECH
Mepo2g04055 2 49563825 49566653 Mepo6g00619 6 6353499 6355636 PCT