Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00618 ATGGCTGATCATTCATCAAGCAATGGAAACCATGATACGGTTCTGAATGTAAATGGTGATGCCTCCCAAAATTGTGATGAGTCATGCATCCAAGACTATGTGCCTCTTTTGCAGAAGTTGGTAGCAGAGGTGGTGGGGACGTATTTCTTGATATTTGCTGGGTGTGCTGCTGTTGTGGTGAACCTTGACAACGACAAAGTGGTAACACATCCTGGGATCTCAATTGTTTGGGGCCTCACTGTTATGGTTTTGGTTTACTCTGTTGGTCACATCTCTGGTGCTCATTTCAATCCTGCTGTAACCATTGCTCATGCTTCAACCAAAAGGTTCCCCGTTAAGCAGGTACCGGCTTATATAATATCACAAGTTCTTGGATCAACCCTTGCAAGTGGAACACTTAGGCTTATATTCAATGGCAAGGAAAACCATTTTTCGGGAACACTTCCAGCTGGTTCTGATCTCCAGGCATTTGTGGTTGAATTCATAATCACTTTTTATCTTATGTTCGTCATTTCTGGAGTGGCAACAGACAATAGAGCGATTGGTGAGTTGGCCGGACTTGCAGTTGGATCTACTGTGCTTCTAAATGTTATGTTTGCTGGGCCAATTACTGGAGCATCAATGAATCCTGCAAGGAGCTTAGGGCCTGCTATTGTGCACCATGAATATAGAGGAATATGGATATATTTGGTATCAACAACTCTTGGTGCCATTGCTGGTACATGGGCATATACTTTCATCCGGTACACAAACAAGCCAGTGCGTGAAATTAGTAAGAGTGCCTCTTTCCTTAAAGGAGTAGAAAATGGTGGAGCTAAGTGA 822 0.4331 MADHSSSNGNHDTVLNVNGDASQNCDESCIQDYVPLLQKLVAEVVGTYFLIFAGCAAVVVNLDNDKVVTHPGISIVWGLTVMVLVYSVGHISGAHFNPAVTIAHASTKRFPVKQVPAYIISQVLGSTLASGTLRLIFNGKENHFSGTLPAGSDLQAFVVEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVHHEYRGIWIYLVSTTLGAIAGTWAYTFIRYTNKPVREISKSASFLKGVENGGAK 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00618 273 Gene3D Glycerol uptake facilitator protein. 3 260 IPR023271 -
Mepo6g00618 273 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00618 273 PRINTS Major intrinsic protein family signature 190 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00618 273 PRINTS Major intrinsic protein family signature 227 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00618 273 PRINTS Major intrinsic protein family signature 77 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00618 273 PRINTS Major intrinsic protein family signature 114 133 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00618 273 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00618 273 NCBIfam MIP family channel protein 42 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00618 273 ProSitePatterns MIP family signature. 95 103 IPR022357 -
Mepo6g00618 273 SUPERFAMILY Aquaporin-like 33 257 IPR023271 -
Mepo6g00618 273 Pfam Major intrinsic protein 35 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00618 273 CDD MIP 38 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00618 273 PANTHER AQUAPORIN NIP2-1 23 263 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00618 Mepo-Chr6 6343819 6347002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00618 18 269 Major Intrinsic Protein MIP AT5G37820 58.824 8.94e-101 295