Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00604 ATGACTAGGGCTATTCGGAATAGGGTACTCAAAGATGCAAATGGTGATATTAGTGATCATATAAGAAACCACATCCATTTAACAAATTGTATTCACTTGAAGAACCATATGCATAAAAACAGTCCAATAATTGCTGATAGGTCTATTATGAGAGACCTTGTTGCGCTTCAAAGATCGCGTTCTCTTCGTGATCCTTCTGCAAGTCCTCCATCATGGCACTCTCCTTCTGTAGTTGACTTGCTTTTCAAAAGAGCCGATAATGATGGCATGAGTCAAGGGGGAAGAAGGTCTGTAGGTAATGACAGTAGGAAGGAAGGTCGGAGATTGTCTAAAATTGGAAACTCACCACCGTTGGTGAGTAAAGGTACATCAAGGGTTGCTCCAGGTGAGGCTAGTAGGGGTAATGATGCGGTACCTGCGGCAACTAGTGAACGAAGTAGCAGGAGTGGAATTGGGAATGGGAGGAGAGTTGGGAGAGAAGAATCTGGCAGGAAGAGTAATAGGCCTGATTATTTGGAAGTTACTAGTCAAGAACAACTTCTTCATGAGGCTGGAAAAAGTTTGGCTGAAGATGTAGTTTCGAGGCTTTCTCAATCTATAGAGAGAAAGAGTAGGCAGAGGGGAAAGAATGTTCAAGAGGTTGAAGCTAAGACTCTTTCTGAACAGCTGAATGATGTTCCTTTGGACAGTGATGATCTAGCGTCGTCAAACATTCATTTTCGGGCAAGGTTTCCAAGACAGGAAAAAATTATTGAGCAGGCACAACAAGCTAGCGTGCGCGGTCATGCAAATGGAATGAATAGGATAAAAAGGCGTAAATTCCGAAGCACAAGAAGAGCTCGGGTTGCTACGATGTCAAGAGATATTGGAGCTGAGAATGAATTGTCTGTGGCTTCCAATTCATTACCTGAGGGTTCAGCTCACCAGAAATATCACTCGGAGGAGGTGGATAATTATGCAGATGATAATGTTACCAGGGCTCCGAAAAACGGGTGTGGCATGCCTTGGAATTGGTCCAGAATTCATCATAGAGGCAAAACATTCCTTGATATTGCTGGAAGAAGTTTGTCTTGTGGTTTATCTGACTCAAGGTTAAAGAAAGGGACATCGTTAACTTCCAATGGAAGAAATATTTCTGTGATGCCTGTAGCAGCTGACGACTCTTGCTCATGTACTAACTCTGAAGCAGAAGCACTGCCTTTACTTGTTGACGCATCTGGATCTCATGGAAGCACTGAAAATGCTTGTTGGGGCCGTGGTTATTCCGGTGAACTAGGTATTTACGGTGATAATTTATTCAAGCAAGATATTGATTCTGATCTTGCTTCTGAAGCTAGATCTGGTAGCCAGCATAATAAGTTGAGACGGAATCATCATAGTAGACACCAAAGTTTAACTCAAAAGTATGTTCCACGAACCTTCAGAGATATGGTTGGACAGAATTTAGTGGCGCAAGCTCTTTCGAATGCAGTGTCGAGACGGAAAGTTGGATTGCTGTATGTGTTTTACGGTCCCCATGGCACCGGGAAAACTTCCTGTGCTCGCATATTTGCCAGAGCATTGAATTGTAGTTCGTCAGAACACCCAAAACCCTGTGGTTTTTGCAATTATTGCATAGCACATGATATGGGAAAGAGTAGGAATATAAGGGAAGTTGGTCCAGTCAGTAATTTTGACTTTGAGAACGTCATGGATCTACTTGACAATATGATTGTTTCTCAGCTTCCGTCACAATACCGAGTGTTTATTTTCGATGATTGTGATACTTTGTCAGCAGATTGTTGGAACGCTATATCAAAGGTCATTGATCGAGCACCTAGACGTGTGGTTTTTATCCTTGTCAGTACTAGTCTTGATGTCTTGCCTCATATAATAATATCCAGGTGTCAAAAATTCTTTTTCCCAAAGCTTAAGGATTCAGATATCGTATATACACTGCACGGGATTGCAACCAAAGAAGGGCTAGATATTGATAAGGATGCCTTGAAACTCATTGCATCAAGGTCCGACGGATCATTGAGAGATGCTGAGATGACACTTGAACAACTTAGTTTGCTTGGGCAGAGAATTTCCGTTCCTCTTGTTCAAGAGCTGGTAGGGCTTATCTCTGATGAGAAGTTGGTAGATCTGCTTGATTTAGCATTATCTGCGGACACAGTAAACACTGTGAAGAATTTGAGAGTGATAATGGAAGCAGGTGTTGAGCCATTAGCATTGATGTCACAGCTTGCTACAGTAATTACTGATATACTTGCTGGGACCTATGATTTTGCTAAAGAAAGGTGCAGACGGAAGTTCTTCCGGAGACAACCACTGTCCAAAGAAGACATGGAAAAGCTTCGCCAGGCTTTGAAAACTTTATCTGAGGCGGAGAAGCAGTTAAGGATGTCCAATGACAAGCTAACATGGCTGACAGCTGCATTGCTTCAACTTGCTCCTGACCAGCAATATGGGTTGCCAACTTCATCTGATAATAGTTTCAACCATAGTCCATTTACTCTAAATAATGGAAACGTGAAAGAAGCTACTAGAAACACTGGTAATCCTGTAGAAATTCTTAACAGAACAAGGCGAATGTCAATGGATGCTAGAATGGAAAGTTCTAATGCTGGAAGTTCAGCAGATAGAAGGCATAGTGTGTCTGGTTATGCTCCTCAACATACTTATTCACATTCCACCGATAAGACTAGGATCAATGAAAGGCAGACTTTGGATAGAAACCGCAAAGAAATCGAAGAGATATGGTTAGAGGTGCTAGAGAGGATTCACTATCCCGGTCTCAAAGAGTTTTTGTATAAAGCAGGCAAGCTGATCTTCATTAGTTTTGGGGCAGCTCCAACAGTGCAGCTAATGTTTAACTCTCAACTTTCCAAATCTACTGCTGAGAAATTTACTGGTCACATCTTACAAGCATTTGAATCTGTTCTTGGGTCTTCCGTAACCATAGAAATTAGATGCGAGGCAAATAAAGATGCAGGCTCTCCTGTTCAACTTCCTCTTGTATTGCCTTCTATCAATGACGGTTCATCTCAAGTTAGAGACTTAAATGATGTTGGCACTGAAAAGAGAAGGAGTGAAATTGTAGAAGAAGAAGCTTCCCATATGGAGCACAAGAATAATGAGCAACAGGTTGATGGTCACGCAACATATAAAAATCAAGATGGTACAAGTATGGGGCAAGTGTTAGCTTCCCAAAAAGTACCGATCGTTAAGTCACATTTAGTCCGAAGAAAGCTTAGTGAGCAAAGTCAAAGTCGAAGTCTTGTGAAAAGTAAGGTATCTCTCGCTCATGTAATCCAGCAGGCAGAAGGTCAGCGAAGTGGGTGGTCAAAACGCAAAGCAGTTTCCATTGCAGAAAAGCTTGAACAAGAGAATCTGAGATTGGAGCCAAGATCAAGGAGCTTGTTATGCTGGAAAGCATCTAGAGCGACTCGTAGGAAGCTGTCGCGCTTGAAAATCCGAACCCGAAAAACACATGCATTGCTGAACCTTGTCTCATGTGGGAAATGTCTTACCACCAAATCTCCAAGGTAG 3534 0.4213 MTRAIRNRVLKDANGDISDHIRNHIHLTNCIHLKNHMHKNSPIIADRSIMRDLVALQRSRSLRDPSASPPSWHSPSVVDLLFKRADNDGMSQGGRRSVGNDSRKEGRRLSKIGNSPPLVSKGTSRVAPGEASRGNDAVPAATSERSSRSGIGNGRRVGREESGRKSNRPDYLEVTSQEQLLHEAGKSLAEDVVSRLSQSIERKSRQRGKNVQEVEAKTLSEQLNDVPLDSDDLASSNIHFRARFPRQEKIIEQAQQASVRGHANGMNRIKRRKFRSTRRARVATMSRDIGAENELSVASNSLPEGSAHQKYHSEEVDNYADDNVTRAPKNGCGMPWNWSRIHHRGKTFLDIAGRSLSCGLSDSRLKKGTSLTSNGRNISVMPVAADDSCSCTNSEAEALPLLVDASGSHGSTENACWGRGYSGELGIYGDNLFKQDIDSDLASEARSGSQHNKLRRNHHSRHQSLTQKYVPRTFRDMVGQNLVAQALSNAVSRRKVGLLYVFYGPHGTGKTSCARIFARALNCSSSEHPKPCGFCNYCIAHDMGKSRNIREVGPVSNFDFENVMDLLDNMIVSQLPSQYRVFIFDDCDTLSADCWNAISKVIDRAPRRVVFILVSTSLDVLPHIIISRCQKFFFPKLKDSDIVYTLHGIATKEGLDIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQRISVPLVQELVGLISDEKLVDLLDLALSADTVNTVKNLRVIMEAGVEPLALMSQLATVITDILAGTYDFAKERCRRKFFRRQPLSKEDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAALLQLAPDQQYGLPTSSDNSFNHSPFTLNNGNVKEATRNTGNPVEILNRTRRMSMDARMESSNAGSSADRRHSVSGYAPQHTYSHSTDKTRINERQTLDRNRKEIEEIWLEVLERIHYPGLKEFLYKAGKLIFISFGAAPTVQLMFNSQLSKSTAEKFTGHILQAFESVLGSSVTIEIRCEANKDAGSPVQLPLVLPSINDGSSQVRDLNDVGTEKRRSEIVEEEASHMEHKNNEQQVDGHATYKNQDGTSMGQVLASQKVPIVKSHLVRRKLSEQSQSRSLVKSKVSLAHVIQQAEGQRSGWSKRKAVSIAEKLEQENLRLEPRSRSLLCWKASRATRRKLSRLKIRTRKTHALLNLVSCGKCLTTKSPR 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00604 1177 MobiDBLite consensus disorder prediction 154 168 - -
Mepo6g00604 1177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 500 684 IPR027417 -
Mepo6g00604 1177 NCBIfam DNA polymerase III subunit gamma/tau 463 811 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Mepo6g00604 1177 MobiDBLite consensus disorder prediction 444 466 - -
Mepo6g00604 1177 MobiDBLite consensus disorder prediction 86 171 - -
Mepo6g00604 1177 Gene3D - 454 634 IPR027417 -
Mepo6g00604 1177 SMART AAA_5 496 637 IPR003593 GO:0016887
Mepo6g00604 1177 Pfam DNA polymerase III subunits gamma and tau domain III 693 752 IPR022754 GO:0003887
Mepo6g00604 1177 Gene3D - 638 700 - -
Mepo6g00604 1177 Pfam DNA polymerase III, delta subunit 480 637 - -
Mepo6g00604 1177 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 466 877 - -
Mepo6g00604 1177 MobiDBLite consensus disorder prediction 863 895 - -
Mepo6g00604 1177 CDD HLD_clamp_pol_III_gamma_tau 637 700 IPR045085 -
Mepo6g00604 1177 FunFam DNA polymerase III subunit gamma/tau 459 636 - -
Mepo6g00604 1177 FunFam DNA polymerase III subunit gamma/tau 638 700 - -
Mepo6g00604 1177 SUPERFAMILY post-AAA+ oligomerization domain-like 708 811 IPR008921 GO:0003677|GO:0006260
Mepo6g00604 1177 Coils Coil 773 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00604 Mepo-Chr6 6208787 6214975 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00604 463 761 Core DNA Replication Machinery Family AT1G21690 23.684 4.17e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00604 - - gmx:100809005 1847.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00604 6 6208787 6214975 Mepo6g00604 6 6208787 6214975 ECH