Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00600 ATGGAAAGATCATCACTCTCTTCTTCTGCTAAAAGGCGAGGTATAAAGAAAAGGGTAGTAGAAATTCCAATGAAGAATGTGGAAGGGACTAATACTCCACCGTCAGATTCATGGGCTTGGAGAAAGTATGGTCAGAAACCCATCAAAGGTTCCCCTTATCCAAGAGGATACTATAGATGCAGCAGTTCAAAGAATTGTCCAGCAAGAAAACAAGTGGAAAGAAACCACATGGACCCCACCGTACTCCTTGTAACATACACCTCCGATCACAACCACGCCGTGCCACCACCAAGAAACTACCGCAACACAAGCAACAACACCGCATCAAACAAAGACTCAGAATCAGAACCTGAACCAGAACAAGAACAAGAACCCGATGAAACGTTTACGAATATTGAAGAAAATTCAATGATCACCACCGGTGATGAGTTAGGAGGATGGTTTGGAGATGTGGAGGCGATCGGATCGCCGGCGGTGTTGGAGTGTCCGTTATTCTCGGAGAAGGAAGTGTCGATGTTGGGAGAAGAGGAGATGTCGTTGTTTGCTGATCTAGGTGAGTTGCCGGAGTGTTCGGCGGTGTTTTGGAGAGGGAGGAGGAGTGGTGCCGGCGCCGGCGCCGGTGGTGATGTTAGTGTGGGACCACTAGTTGAAGCTAATTGCTCGTTGTGA 669 0.4798 MERSSLSSSAKRRGIKKRVVEIPMKNVEGTNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKNCPARKQVERNHMDPTVLLVTYTSDHNHAVPPPRNYRNTSNNTASNKDSESEPEPEQEQEPDETFTNIEENSMITTGDELGGWFGDVEAIGSPAVLECPLFSEKEVSMLGEEEMSLFADLGELPECSAVFWRGRRSGAGAGAGGDVSVGPLVEANCSL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00600 222 Gene3D WRKY domain 21 96 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo6g00600 222 Pfam WRKY DNA -binding domain 36 92 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g00600 222 ProSiteProfiles WRKY domain profile. 35 95 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g00600 222 MobiDBLite consensus disorder prediction 97 112 - -
Mepo6g00600 222 SUPERFAMILY WRKY DNA-binding domain 31 95 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo6g00600 222 MobiDBLite consensus disorder prediction 89 130 - -
Mepo6g00600 222 SMART WRKY_cls 34 94 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g00600 222 MobiDBLite consensus disorder prediction 1 23 - -
Mepo6g00600 222 MobiDBLite consensus disorder prediction 1 55 - -
Mepo6g00600 222 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 10 192 IPR044810 GO:0003700
Mepo6g00600 222 FunFam WRKY transcription factor 65 17 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00600 Mepo-Chr6 6171455 6173215 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00600 4 204 WRKY Transcription Factor Family AT1G29280 49.545 1.29e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo6g00600 WRKY 1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00600 - - psat:127080568 356.295