Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00596 ATGGTAGCACATGCAACTGATAATGGAATCCGTAGCCGAAAGAAATCATCAAGAGGTCACCACAGGTTTGTAGGAGTTCGTCAAAGGCCATCCGGAAGATGGGTAGCAGAGATCAAAGACTCACTACAGAAAGTTAGGCTTTGGCTTGGAACATTCGACACAGCCGAAGAGGCAGCTCGTGCTTATGACACTGCTGCTAGAGCTTTGAGAGGTGCTAATGCTAGAACCAACTTTGAATTGCCAGAATCTGAAACAAATGGCGGTGTAGGTTCGAAGCGCGGTGCTGGTTCCAAATTCATGCTAGAGAATACAGAACCTTTTTCTTTTGAAGATGTCAGCGACTCGGGTTCAGGTTCAGAACATGGCCTTCTTGGTGCACTCAAGGCCAAACTTTTTGACGGAAAAGAAGGGAAATTTTCATTTTCATTTCCTTCTGGTAGCATGGTTTCAAAATCAACTCAGAATTTATCTGGAAAGAAAGACTCATCATTATCAGCTACTTATTGCCTCTCACAGATGAATGAAGCTCATGCAAATACACTGCCTAGTTCTTTGAGTACTTCATCAAACACTTTTGCTAAGAGTGTGGCTATCCCAAATCATGATCATGAAATTGGTCAAACACCATCTATGACAAACATGTTATGGTCCAATGAAATGGAAAATGATTTTCCTTGGCCTATTCAGATGAGTCATGATGTTCATGAGAATCATGAAAATAGTACTAGTATGCTTGCATCTGGAAGTACATCAAATTTTGCATGGCCACTAATAGAGTCCAATATTGACATGACATGTATGGACCAAGGGATACTAAATAGTAACAGAAGTGATCAAATGAATATGATGAACATGCAGTTACCACCTCTAATTGGTGGAGCAAGTAGTGATGGGTTTTGGACATTGGATCAGCAGCAACAGTTTGTGCAATGTGAGAATAATAATAGTTGGTTTGGTTCTGGTGGTGGATCTTGGGATCCTCTTCTCTATGTGCCATCTGAGCTAGGCTAG 1011 0.4135 MVAHATDNGIRSRKKSSRGHHRFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDTAEEAARAYDTAARALRGANARTNFELPESETNGGVGSKRGAGSKFMLENTEPFSFEDVSDSGSGSEHGLLGALKAKLFDGKEGKFSFSFPSGSMVSKSTQNLSGKKDSSLSATYCLSQMNEAHANTLPSSLSTSSNTFAKSVAIPNHDHEIGQTPSMTNMLWSNEMENDFPWPIQMSHDVHENHENSTSMLASGSTSNFAWPLIESNIDMTCMDQGILNSNRSDQMNMMNMQLPPLIGGASSDGFWTLDQQQQFVQCENNNSWFGSGGGSWDPLLYVPSELG 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00596 336 Gene3D AP2/ERF domain 21 80 IPR036955 GO:0003700|GO:0006355
Mepo6g00596 336 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Mepo6g00596 336 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Mepo6g00596 336 MobiDBLite consensus disorder prediction 1 25 - -
Mepo6g00596 336 CDD AP2 22 79 IPR001471 GO:0003700|GO:0006355
Mepo6g00596 336 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Mepo6g00596 336 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Mepo6g00596 336 FunFam ethylene-responsive transcription factor RAP2-11 21 80 - -
Mepo6g00596 336 Pfam AP2 domain 22 71 IPR001471 GO:0003700|GO:0006355
Mepo6g00596 336 SUPERFAMILY DNA-binding domain 23 79 IPR016177 GO:0003677
Mepo6g00596 336 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 18 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00596 Mepo-Chr6 6149502 6150551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00596 4 78 AP2-EREBP Transcription Factor Family AT5G19790 65.333 3.19e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mepo6g00596 AP2 9.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00596 - - psat:127080595 513.842