Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00589 ATGGCCAAGTTATACTCTTTTCACTCTTTGCTCTTTATTCTCTCTGCCTCACTCTATTATTACTTCTTCTTCACTTGCTTAGTTGTGAGTAGTGAAAAAAACATAACTACCGATGAATTTTCACTTCTTGCATTCAAATCCTCAATTACCTTAGACCCTTATCATATTCTTAGTAATTGGTCAATTTCCTCTTCTACTTGCAATTGGGTTGGTGTTACTTGTGATGAACATCATGGAAGAGTAAATGCATTGAATCTTAGTAGCATGGGCCTTGAAGGTACCATTTCTCCTCAATTGGGAAATCTCTCTTTCCTTGATGTTCTTGATCTACAAGGGAATAATTTCCAAGGTGAGTTACCACATGAGTTACTTCAGTTGAAAAGATTGAAATTGTTGAGTTTGAGCGACAATGATTTTGTTGGAGAAATTCCTTCAAGGATAGGGGAGTTATCAAAACTTCAAGGATTGGATATTGGCCAAAACAATATTGTTGGAGTTATTCCTGAATCTATATCCAATTTGTCAATGTTAGAATATCTAAATTTGATATCAAATCACATCAAAGGAACCATTCCATATGATATTGGTCAACTTCGTCAGTTGAAGTTTTTGAGTCTTAGTAATAACAAGCTCTCTGGAATGATACCAACAACAATTTGCAACATGTCATCACTTGAAGAAATTTATTTAGCAAATAACTCATTATCAGGAGAAATTCCGAAAGGAATTGGTGATGTTACACAACTGAACATGGTCAACCTTCAGGATAATTTCCTCACGGGCAACATATTAATGTTCAACAACACATCATTGCAATACTTAGATCTTGGATATAATAATATGACCGGCATTCTTCCATCAAATGTTTGTCAATGGCTTCCAAACCTTAATTTCCTCTGTCTTGTTCATAATGTTTTTTCTGGTGAGATGCCAAATGTTTGGCATGATTGCAAAGAGTTGGAATATTTGGAACTATCAGGGAATAATTTTGACAAAGGACGTATTCCGGCCGACATTGGAAAATTGACCAAACTTCAAATTTTGTATCTCACAGAAAACAACTTCGAGGGTGAAATTCCATTATCCCTCTTCAACATCTCTTCTTTGAGAGTGATTAGCCTTCGTAGTAACAATTTAAATGGAACTCTTCCACGATCGATTGGCAACTGCACATTCTTACAAGAGTTACATTTCAGTTATAACTTATTTACAGGAGTTCCAAGAAGGATTTCCTATTATGAACTCGTGCAAGCAACTAATGGATTCAGTGAGAGTAATTTACTTGGAAGAGGTGGTTTTGGATCAGTGTATAAAGGAATGCTTTCTAGTGGGAAGATGATAGCAGTTAAAGTACTTGACTTAACAATGGAAGCAACATTAAGAAGCTTTGATGCAGAATGCAATGCAATGCGCAACCTTCGGCATAGAAATCTCGTTCAAATTATCAGTAGTTGTTCAAATCCTGATTTCAAATCTCTAGTGATGGAGTTTATGTCAAATGGAAGTGTGGAAAAATGGTTGTACTCTGATAACTATTGTTTGAATTTCTTGCAAAGGTTGAACATAATGATAGATGTGGCATCAGCGTTGGAGTATCTCCATCATGGTTCATCAATACCAGTGGTTCATTGTGACTTGAAGCCTACTAATGTGTTACTGGATGAAGATATGATTGCACATGTGAGTGATTTTGGCATTTCCAAGCTCTTGGATGAAGGACATTCTAAAACTCATACAAAAACTTTAGCTACTCTTGGCTATGTTGCACCAGAGTATGGATCTAGGGGGATCATTTCAGTTAAAGGAGATGTGTACAGCTATGGGATAATGCTAATGGAAATGTTCACTAGAAAGAAGCCAACAAATGAAATGTTTTCAGAAGAATTAACCTTGAAAACTTGGATTAGTGAGTCAATGGCCAATTCCAGTATGGAAGTTGTGGATTCCAATTTAGACTCACAACATGGGAAAGAAATTCATGATATCTTAGCTTTAGCATTGAGATGTTGTGAAGATTCACCCGAGGCTCGGATTAATATGACATATGTAACTACCTCGTTAATCAAGATCAAGACCTCACTCATCCGGTGA 2091 0.362 MAKLYSFHSLLFILSASLYYYFFFTCLVVSSEKNITTDEFSLLAFKSSITLDPYHILSNWSISSSTCNWVGVTCDEHHGRVNALNLSSMGLEGTISPQLGNLSFLDVLDLQGNNFQGELPHELLQLKRLKLLSLSDNDFVGEIPSRIGELSKLQGLDIGQNNIVGVIPESISNLSMLEYLNLISNHIKGTIPYDIGQLRQLKFLSLSNNKLSGMIPTTICNMSSLEEIYLANNSLSGEIPKGIGDVTQLNMVNLQDNFLTGNILMFNNTSLQYLDLGYNNMTGILPSNVCQWLPNLNFLCLVHNVFSGEMPNVWHDCKELEYLELSGNNFDKGRIPADIGKLTKLQILYLTENNFEGEIPLSLFNISSLRVISLRSNNLNGTLPRSIGNCTFLQELHFSYNLFTGVPRRISYYELVQATNGFSESNLLGRGGFGSVYKGMLSSGKMIAVKVLDLTMEATLRSFDAECNAMRNLRHRNLVQIISSCSNPDFKSLVMEFMSNGSVEKWLYSDNYCLNFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPTNVLLDEDMIAHVSDFGISKLLDEGHSKTHTKTLATLGYVAPEYGSRGIISVKGDVYSYGIMLMEMFTRKKPTNEMFSEELTLKTWISESMANSSMEVVDSNLDSQHGKEIHDILALALRCCEDSPEARINMTYVTTSLIKIKTSLIR 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00589 696 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 498 696 - -
Mepo6g00589 696 Gene3D Phosphorylase Kinase; domain 1 409 497 - -
Mepo6g00589 696 SMART serkin_6 422 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00589 696 Gene3D Transferase(Phosphotransferase) domain 1 498 694 - -
Mepo6g00589 696 Gene3D Ribonuclease Inhibitor 38 153 IPR032675 -
Mepo6g00589 696 Pfam Leucine rich repeat 152 211 IPR001611 GO:0005515
Mepo6g00589 696 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 269 405 - -
Mepo6g00589 696 ProSitePatterns Protein kinases ATP-binding region signature. 428 450 IPR017441 GO:0005524
Mepo6g00589 696 FunFam Serine-threonine protein kinase plant-type 404 497 - -
Mepo6g00589 696 Pfam Leucine rich repeat N-terminal domain 37 75 IPR013210 -
Mepo6g00589 696 Gene3D Ribonuclease Inhibitor 265 408 IPR032675 -
Mepo6g00589 696 ProSiteProfiles Protein kinase domain profile. 422 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00589 696 Gene3D Ribonuclease Inhibitor 155 264 IPR032675 -
Mepo6g00589 696 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 35 174 - -
Mepo6g00589 696 Pfam Protein kinase domain 423 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00589 696 SUPERFAMILY Protein kinase-like (PK-like) 402 687 IPR011009 -
Mepo6g00589 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Mepo6g00589 696 SMART LRR_typ_2 342 366 IPR003591 -
Mepo6g00589 696 SMART LRR_typ_2 102 126 IPR003591 -
Mepo6g00589 696 SMART LRR_typ_2 390 413 IPR003591 -
Mepo6g00589 696 SMART LRR_typ_2 222 246 IPR003591 -
Mepo6g00589 696 SMART LRR_typ_2 198 221 IPR003591 -
Mepo6g00589 696 SMART LRR_typ_2 150 174 IPR003591 -
Mepo6g00589 696 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 175 430 - -
Mepo6g00589 696 SUPERFAMILY L domain-like 58 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00589 Mepo-Chr6 6092986 6100727 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00589 79 696 Receptor kinase-like Gene Family AT3G47570 34.947 1.09e-107 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo6g00589 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00589 - - mtr:25485995 578.941