Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00588 ATGGGTAACAATTTAAATGGAACTCTTCCAGATGAGACGTGTAATCAACTTCCTCACCTTGAAATCTTTTCTCTAAACACTAATTATGTTGAAGGAATCATTCCACGCTCGATTGGCAACTGCACATCGTTGCAAGTGTTATATTTAGATCATAACTTATTTACAGGCATTTTTGTTGTTGTATACATAATACTTCGAAAGCATAAAAGGAGAAATGTTGAAAATCCACTTGAAAGGGGTTTATCCACTATAGGAGTTCCAAAAAGGATTTCCTATTATGAACTTGTCCAAGCAACGAATGGATTCAGTGAGAGTAATTTACTTGGAAGGGGTGGATTTGGATCTGTGTATCAAGGAATGCTTTCTAGTGGGAAGATTATAGCAGTTAAAGTACTTGACTTGACAATGGAAGCAGCATCAAGAAGCTTTGATGCTGAATGCAATGCAATGTGCAACCTTCGGCATCGAAATCTTGTTCAGATTATCAGTAGTTGTTCAAATCCTGATTTCAAATCTCTAGTGATGGAGTTTATGTCAAATGGAAGTGCGGAAAAATGGTTATACTCTGATAACTATTTTTTGGATTTCTTGCAAAGGTTGAACATAATGATAGATGTGGCATCTGCATTGGAGTATCTCCATCATGGTTCTTCAATACCAGTGGTTCATTGTGATTTGAAGCCTAGTAATGTGTTGCTGGATGAAGATATGATTGCACATGTGAGTGATTTTGGGATTTCCAAGCTCTTGGATGAAGGACAATCAAAAACGCATACAGGGACTTTAGCTACTCTTGGCTATGTTGCACCAGAGTATGGATCGAAGGGAGTCATTTCAGTTAAAGGAGATGTGTACAGCTATGGGATAATGCTAATGGAAATGTTCACTGGAAAGAAGCCAACAAATGAAATGTTTTCAGAAGAATTAACCTTGAAAACTTGGATTAGCGAATCAATGGCCAATTCCAGTATGGAAGTTGTGGATTCCAAGTTAGGCACACAAAATGGGAAAGAAATTTATGATATCTTAGCTTTAGCATTGAGATGTTGTGAAGATTCACCTGTGGCACGAATTAATATGACAGATGTAACTGCGTCGTTGATCAAGATCAAGACCTCATTCATCCAATGA 1131 0.374 MGNNLNGTLPDETCNQLPHLEIFSLNTNYVEGIIPRSIGNCTSLQVLYLDHNLFTGIFVVVYIILRKHKRRNVENPLERGLSTIGVPKRISYYELVQATNGFSESNLLGRGGFGSVYQGMLSSGKIIAVKVLDLTMEAASRSFDAECNAMCNLRHRNLVQIISSCSNPDFKSLVMEFMSNGSAEKWLYSDNYFLDFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDEDMIAHVSDFGISKLLDEGQSKTHTGTLATLGYVAPEYGSKGVISVKGDVYSYGIMLMEMFTGKKPTNEMFSEELTLKTWISESMANSSMEVVDSKLGTQNGKEIYDILALALRCCEDSPVARINMTDVTASLIKIKTSFIQ 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00588 376 SUPERFAMILY L domain-like 3 57 - -
Mepo6g00588 376 ProSitePatterns Protein kinases ATP-binding region signature. 108 130 IPR017441 GO:0005524
Mepo6g00588 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Mepo6g00588 376 Gene3D Phosphorylase Kinase; domain 1 85 177 - -
Mepo6g00588 376 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 58 373 - -
Mepo6g00588 376 Gene3D Ribonuclease Inhibitor 1 60 IPR032675 -
Mepo6g00588 376 Pfam Protein kinase domain 103 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00588 376 Gene3D Transferase(Phosphotransferase) domain 1 178 375 - -
Mepo6g00588 376 Pfam Leucine rich repeat 3 53 IPR001611 GO:0005515
Mepo6g00588 376 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 178 376 - -
Mepo6g00588 376 SMART serkin_6 102 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00588 376 ProSiteProfiles Protein kinase domain profile. 102 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00588 376 SUPERFAMILY Protein kinase-like (PK-like) 83 367 IPR011009 -
Mepo6g00588 376 FunFam Serine-threonine protein kinase plant-type 83 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00588 Mepo-Chr6 6068846 6071597 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00588 60 376 Receptor kinase-like Gene Family AT3G47570 43.188 2.32e-85 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo6g00588 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00588 - K13420 mtr:25485995 531.561