Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00587 ATGGCCAAGTTATACTCTTTTCACTCTTGGCTCTGTATTCTCTCTACCTCACTCTATTATTATTTCTTCACTTGCTTAGTTGTGAGTGGTAAAAAAAACATAACTAGCGATGAATTTGCACTTCTTGCATTCAAATTCTCAATTACCTTAGACCCTTATCATATGCTTAGTAATTGGTCAATTTTCTCTTCATCTTCTTCTTTCTCTTCATGCAATTGGATTGGTGTCACTTGTGATGAACATCATGGAAGAGTAAATGCATTGGATCTTAATAACATGGACCTTGAAGGTACAATTTCTCCTCAATTGGGAAATCTTTCTTTCCTTGTTGTTCTTGATTTACAAGGCAATAGTTTCTATGGTGAGTTACCACATGAGTTACTTCAGTTGAAGAGATTGAAATGGTTGGATTTGAGCGACAATGATTTTGTTGGAGAAATTCCTTCAAGGATAGGAGACTTATCAAAACTTCATCATTTGGATCTTTACTATAATAATCTTGTTGGAGCTATTCCTCAATCTATATCCGACTTGTCAATGTTACGGTACCTAGATTTGAGTACAAATTTCATCAAAGAAACTATTCCACATGCTATTGGTCAACTTGATCAGTTGAGGATTTTGGATATTAGTAATAACATGCTGTCTGGAATCATACCAACAACAATTTCCAACATGTCTTTACTTGAAGAAATTTATTTACTAAATAACTCCTTATCAGTATTTGTGTTTACACCACGCTTCATCATCATATACATGTGGTTTTGTTTATTTGTTGTTTCTCTATGGTATTTGATGTTAGGTTCGATACCAACGGAGATTGGCCATCTCAGTCAACTTCAGGTTCTACAAATGGGATATAACAGCTTGAGTGGACCAATTCCTTCAAAAGTCTTCAACATTTCAACATTGGAAATTTTGAGTCTTGAACTAAATTCTCTCTCAGGCATGCTTCCATCAAATTTTGGATTTGGCCTTCCTAACCTACAAAGACTGGAAATATCTGGAAACAGATTTGTTGGAAAAATTCCAAATAGTATATCCAATGCTTCAAATCTTTTGCAAGTTGACTTTAGTGATAATGAATTTAGTGGAATTATGACCAATTCTTTTGGAGATTTAAGATTCCTCAATTTTCTCCGCATAAGTGGCAATAACTTGACGTTATTTGATGATTCTCTTGAAATAAACTTCCTTACTTCACTTACAAGTTGCAGATATCTGAAATATCTTGAAGTATCAGGGAATAGTTTACCATCAAAACTTCCCAAGTCCCTTGGAAACTTATCTGTAGAACACTTTTGGGCAAATTCTTGTGGAATTAATGGAAATATTCCACTAGAAATTGGAAACATGAGCAACCTGATTCTATTATCTTTGTGGCATAATGATTTAAATGGATCAATCCCTGGTGTAATTAAAGGGTTACATAAACTTCAATATTTAGATTTTGGTTACAATAGACTGCAAGGATCCATGATTGATGAGCTTTGTGAAATTAAGAGTTTGAGTGAATTGTATTTATTAAGCAATAAGCTTATAGGAGTGTTACCGACATGTTTGGGAAATATGACTTCACTTAGAAAGCTTTACTTAGAATCTAACGAGTTAACCTCTGAGATACCTTCCTCATTTTGGAGTCTCAAAGATATTTTAGTGGTAAACTTATCCTTCAATGCTATAACTGGAAATCTTCCAATGGAGATTAGTAAATTAAGAGCAATTCTGCAATTAGATCTGTCAGGAAATCAAATTTCAAGCAACATTCCTGAAACCATAGGTTCATTAACAACTCTACAAAATCTCTCCTTAGCAAATAACAAATTGTATGGGGAAATTCCCACAACACTTGGTGAATTGGTAAGCTTGAACTTATTGGACTTGTCCCATAATCTTCTTACCGGTTTCATTCCAAAATCCTTAGAGTCACTTGCCTATCTTGAAAGTGTCAACTTTTCCTACAATATGTTACAAGGAGAGATTCCGGATGGTGGCCGATTCAAAAATTACAGTGCTCAATCTTTCATGCATAATGAAGCACTTTGTGGCAGTCCTAACTTACAAGTACCTCCATGTGATCAACATAGGAAAAAGTCAAAGATGCTATCAATCATATGCATATCATCCATAATTGTTGTGTTAGGCATTTTGGTTGTTGCATGCATAATACTTCAAATTCATAAAAGGAGACATGTTGAAAATCTACTTGAAAGGGGTTCCTATTTTGACCTGACTATAGGAGTTCCAAAAAGGATTTCCTATTATGAACTCGTCCAAGCAACTAATGGATTCAGTGAGAGTAAATTACTTGGAAGGGGTGGATTTGGATCTGTGTATCAAGGAATGCTTTCTAGTGGGAAGATGATAGCAGTTAAAGTACTTGACTTGACAATGGAAGCAGCATCAAGAAGCTTTGATGCAGAATGCAATGCAATGTGCAACCTTCGGCATCGAAATCTCGTTCAGATTATCAGTAGTTGTTCAAATCCTGATTTCAAATCTCTAGTCATGGAGTTTATGTCAAATGGAACTTTGAGTAATAATAAAAACATTACCACCGATGAATTATCACTTCTTGCATTCAAATCCTCAATTACCTTAGACCCTTATCATATGCTTAGTAATTGGTCAATTTCCTCTTCTACTTCTTCTTTCTCTTCATGCAATTGGGTTGGTGTTACTTGTGATGAACATCATGGAAGAGTAAATGCATTGAATCTTAGTAACATGGGCCTTGAAGGTACAATTTCTCCTCAATTGGGAAATCTCTCTTTCCTCGCTGTTCTTGATCTACATGGCAATAGTTTCCATGGTGAGTTACCACATGAGTTACTTCAGTTGAAGAGATTGAAATTGTTGAATTTGAGCCACAACGATCTCGTTGGAGAAATTCCTACAAGGATAGGGGAGTTATCAAATCTTCAACAACTGTATATTGGTTATAATAATATTGTTGGGTTTATTCCTGAATCTATATCCAACTTGTCAATGTTAGAATATCTAAGTTTGAAATCAAATCACATCAAAGGAACCATTCCATATGCTATTGGTCAACTTCGTCAGTTGAGGTATTTGAGTCTTGGTAATAACAAGCTCTCTGGAATGATACCAATAACAATTTCCAACATGTCTTTACTTGAAGAAATTTATTTACTAAATAACTCCTTATCAGGGGCGGTGGTAGCCCCAGCTAGCATGGGCACTAGCCCAAGCTCAGCTGCTACTTTCTTTGTACCAACTCCAGTCCAATAG 3252 0.353 MAKLYSFHSWLCILSTSLYYYFFTCLVVSGKKNITSDEFALLAFKFSITLDPYHMLSNWSIFSSSSSFSSCNWIGVTCDEHHGRVNALDLNNMDLEGTISPQLGNLSFLVVLDLQGNSFYGELPHELLQLKRLKWLDLSDNDFVGEIPSRIGDLSKLHHLDLYYNNLVGAIPQSISDLSMLRYLDLSTNFIKETIPHAIGQLDQLRILDISNNMLSGIIPTTISNMSLLEEIYLLNNSLSVFVFTPRFIIIYMWFCLFVVSLWYLMLGSIPTEIGHLSQLQVLQMGYNSLSGPIPSKVFNISTLEILSLELNSLSGMLPSNFGFGLPNLQRLEISGNRFVGKIPNSISNASNLLQVDFSDNEFSGIMTNSFGDLRFLNFLRISGNNLTLFDDSLEINFLTSLTSCRYLKYLEVSGNSLPSKLPKSLGNLSVEHFWANSCGINGNIPLEIGNMSNLILLSLWHNDLNGSIPGVIKGLHKLQYLDFGYNRLQGSMIDELCEIKSLSELYLLSNKLIGVLPTCLGNMTSLRKLYLESNELTSEIPSSFWSLKDILVVNLSFNAITGNLPMEISKLRAILQLDLSGNQISSNIPETIGSLTTLQNLSLANNKLYGEIPTTLGELVSLNLLDLSHNLLTGFIPKSLESLAYLESVNFSYNMLQGEIPDGGRFKNYSAQSFMHNEALCGSPNLQVPPCDQHRKKSKMLSIICISSIIVVLGILVVACIILQIHKRRHVENLLERGSYFDLTIGVPKRISYYELVQATNGFSESKLLGRGGFGSVYQGMLSSGKMIAVKVLDLTMEAASRSFDAECNAMCNLRHRNLVQIISSCSNPDFKSLVMEFMSNGTLSNNKNITTDELSLLAFKSSITLDPYHMLSNWSISSSTSSFSSCNWVGVTCDEHHGRVNALNLSNMGLEGTISPQLGNLSFLAVLDLHGNSFHGELPHELLQLKRLKLLNLSHNDLVGEIPTRIGELSNLQQLYIGYNNIVGFIPESISNLSMLEYLSLKSNHIKGTIPYAIGQLRQLRYLSLGNNKLSGMIPITISNMSLLEEIYLLNNSLSGAVVAPASMGTSPSSAATFFVPTPVQ 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00587 1083 SMART LRR_typ_2 277 301 IPR003591 -
Mepo6g00587 1083 SMART LRR_typ_2 971 995 IPR003591 -
Mepo6g00587 1083 SMART LRR_typ_2 202 225 IPR003591 -
Mepo6g00587 1083 SMART LRR_typ_2 1019 1042 IPR003591 -
Mepo6g00587 1083 SMART LRR_typ_2 923 947 IPR003591 -
Mepo6g00587 1083 SMART LRR_typ_2 106 130 IPR003591 -
Mepo6g00587 1083 SMART LRR_typ_2 326 350 IPR003591 -
Mepo6g00587 1083 SMART LRR_typ_2 572 596 IPR003591 -
Mepo6g00587 1083 SMART LRR_typ_2 620 643 IPR003591 -
Mepo6g00587 1083 SMART LRR_typ_2 524 548 IPR003591 -
Mepo6g00587 1083 SMART LRR_typ_2 154 178 IPR003591 -
Mepo6g00587 1083 Gene3D Ribonuclease Inhibitor 36 150 IPR032675 -
Mepo6g00587 1083 Gene3D Ribonuclease Inhibitor 853 969 IPR032675 -
Mepo6g00587 1083 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 401 696 - -
Mepo6g00587 1083 SUPERFAMILY L domain-like 856 1059 - -
Mepo6g00587 1083 Gene3D Ribonuclease Inhibitor 151 248 IPR032675 -
Mepo6g00587 1083 Gene3D Ribonuclease Inhibitor 970 1072 IPR032675 -
Mepo6g00587 1083 PANTHER OS04G0122200 PROTEIN 267 847 - -
Mepo6g00587 1083 ProSitePatterns Protein kinases ATP-binding region signature. 770 792 IPR017441 GO:0005524
Mepo6g00587 1083 SMART LRR_sd22_2 476 499 - -
Mepo6g00587 1083 SMART LRR_sd22_2 277 303 - -
Mepo6g00587 1083 SMART LRR_sd22_2 971 997 - -
Mepo6g00587 1083 SMART LRR_sd22_2 596 615 - -
Mepo6g00587 1083 SMART LRR_sd22_2 620 646 - -
Mepo6g00587 1083 SMART LRR_sd22_2 572 591 - -
Mepo6g00587 1083 SMART LRR_sd22_2 326 352 - -
Mepo6g00587 1083 SMART LRR_sd22_2 1019 1045 - -
Mepo6g00587 1083 SMART LRR_sd22_2 202 228 - -
Mepo6g00587 1083 SMART LRR_sd22_2 154 180 - -
Mepo6g00587 1083 FunFam Serine-threonine protein kinase plant-type 745 839 - -
Mepo6g00587 1083 Pfam Leucine Rich Repeat 328 349 IPR001611 GO:0005515
Mepo6g00587 1083 Pfam Leucine Rich Repeat 973 995 IPR001611 GO:0005515
Mepo6g00587 1083 Pfam Leucine Rich Repeat 408 429 IPR001611 GO:0005515
Mepo6g00587 1083 Pfam Leucine rich repeat 598 657 IPR001611 GO:0005515
Mepo6g00587 1083 Pfam Leucine rich repeat 185 239 IPR001611 GO:0005515
Mepo6g00587 1083 Pfam Leucine rich repeat 998 1056 IPR001611 GO:0005515
Mepo6g00587 1083 Pfam Leucine rich repeat 526 585 IPR001611 GO:0005515
Mepo6g00587 1083 Gene3D Ribonuclease Inhibitor 254 392 IPR032675 -
Mepo6g00587 1083 Gene3D Ribonuclease Inhibitor 393 701 IPR032675 -
Mepo6g00587 1083 Pfam Protein kinase domain 765 849 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00587 1083 Pfam Leucine rich repeat N-terminal domain 853 896 IPR013210 -
Mepo6g00587 1083 Pfam Leucine rich repeat N-terminal domain 36 79 IPR013210 -
Mepo6g00587 1083 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 967 1060 - -
Mepo6g00587 1083 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 34 199 - -
Mepo6g00587 1083 SUPERFAMILY L domain-like 432 685 - -
Mepo6g00587 1083 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 853 966 - -
Mepo6g00587 1083 SUPERFAMILY L domain-like 65 403 - -
Mepo6g00587 1083 ProSiteProfiles Protein kinase domain profile. 764 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00587 1083 Gene3D Phosphorylase Kinase; domain 1 747 839 - -
Mepo6g00587 1083 SUPERFAMILY Protein kinase-like (PK-like) 744 847 IPR011009 -
Mepo6g00587 1083 PRINTS Leucine-rich repeat signature 205 218 - -
Mepo6g00587 1083 PRINTS Leucine-rich repeat signature 620 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00587 Mepo-Chr6 6031897 6055258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00587 902 989 Receptor kinase-like Gene Family AT3G47570 36.364 1.00e-06 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo6g00587 Pkinase 1.1e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00587 - - mtr:25485995 819.69