Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00586 ATGAATACTAAAAACATAACCACAGATGAATTATCACTTCTTGCATTCAAATCCTCAATTACCTTAGACCCTTATCATATGCTTAGTAATTGGTCAATTTCCTCTTCTACTTCTTCTTTCTCTTCATGCAATTGGGTTGGTGTTACTTGTGATGAACATCATGGAAGAGTAAATGCATTGAATCTTAGTAACATGGGCCTTGAAGGTACAATTTCTCCTCAATTGGGAAATCTCTCTTTCCTTGTATTTCTTGATCTACAAGGCAATAGTTTCCATGGTGAGTTACCACATGAGTTACTTCAGTTGAAGAGATTGAAAATGTTGGATTTGAGCAACAATGATTTCGTTGGAGAAATTCCTTCAAGGATAGGGGAGTTATCAAAACTTCAACACTTGGATCTTGGCCATAATAACATTGTTGGAGTTATTCCTCAATCTATATCCAACTTGTCAATGTTAGAGTATCTAGATTTGAAATCAAATTTCATCAAAGGAACCATTTCACATGCTATTGGTCAACTTCGTCGGTTGAAGTTTTTTAGTCTTAGTAATAACAAGCTCTCTGGAATGATACCAATAACAATTTCCAACATGTCTTCACTTGAAGAAATTCATTTAGCAAATAACTCTTTATCTGGTGAAATTCCAAAAGGAATAGGTGATCTTACACAACTGAGAACGGTGAACCTTCAACGTGAAATTCCATTCTCCCTTTTCAACATCTCTTCTTTGAGAGAGATCAACCTTGACGGTAACAATTTAAATGGAACTCTTCCAGATGAGATGTGTCATCAACTTCCTCAACTTGAAATATTTACTCTACTCGGTAATCATTTTGAAGGAGCCATTCCACGATCGGTTGGCAACTGCACATTGTTACAAACGTTAACTTTACAGGATAACTTTTTTTCAGGCATTTTGGCTATTGCTTGCATAATACTTCAAATGCATAAAAATAAAGAAGTTGAAAATCCACTTGAAAGGGATTTATCAACAAATTTAGGGCTTTTAAAAAGGATTTCCTATTCTGAACTTGTGCAAGCAACTAATGGATTTAGTGAGACTAATTTACTTGGAAAGGGTGGCTTTGGATCTGTGTATCAAGGAATGCTTTCTAATGGGAAGATGGTAGCAATTAAAGTACTTGACTTGAAATTGGAAGCAACAACAAAAAGCTTTAATGCAGAATGCAATGCTATGCGCAATCTTCGGCATCGAAATCTTGTTGAGATCATCACTAGTTGTTCAAATGTTAATTTCAGATCTTTGGTAATGGAGTTAATGTCAAATGGAAGCTTGGAAAAATGGTTATACACTGATAACTATTTTTTAGGTTTCTTGCAAAGGTTGAATATAATGATAGATGTGGCATCTGCATTGGAGTATCTCCATCAAGGTTCTTCAATACCAGTGGTTCATTGTGATTTGAAGCCTAGTAATGTGTTGTTGGATGAAAATATGGTTGCACATGTTAGTGATTTTGGGATTTCCAAGCTCTTGGATGATGGACAATCTAAAGCTCATACTCAGACTTTAGCTACTATTGGTTATGTTGCACCAGAGTATGGATCTAAGGGAGTAATTTCAGTTAAAGGAGATGTATACAGCTTTGGAATAATGCTAATGGAAATTTTCACTGGAAAGAAGCCAACAAGTGAAATGTTTGCAGAAGAATTAACCTTGAAAACTTGGATTAGTGAATCAATGCACAATTCAGTAGTTATGGAAGTTGTGGACAAAAATTTAATCTCACAGCATGGGAAAGAAATTCATGAACTTTTGCCTCATGTATCATCTATTTTTGTTTTAGCATTGAGGTGTTGTGAAGATTTACCTGAGGCAAGAGTTAATATGACAGAAGTAACTGCATCATTAGTAAAAATCAAGACCTTATTCACTCAATGA 1905 0.3501 MNTKNITTDELSLLAFKSSITLDPYHMLSNWSISSSTSSFSSCNWVGVTCDEHHGRVNALNLSNMGLEGTISPQLGNLSFLVFLDLQGNSFHGELPHELLQLKRLKMLDLSNNDFVGEIPSRIGELSKLQHLDLGHNNIVGVIPQSISNLSMLEYLDLKSNFIKGTISHAIGQLRRLKFFSLSNNKLSGMIPITISNMSSLEEIHLANNSLSGEIPKGIGDLTQLRTVNLQREIPFSLFNISSLREINLDGNNLNGTLPDEMCHQLPQLEIFTLLGNHFEGAIPRSVGNCTLLQTLTLQDNFFSGILAIACIILQMHKNKEVENPLERDLSTNLGLLKRISYSELVQATNGFSETNLLGKGGFGSVYQGMLSNGKMVAIKVLDLKLEATTKSFNAECNAMRNLRHRNLVEIITSCSNVNFRSLVMELMSNGSLEKWLYTDNYFLGFLQRLNIMIDVASALEYLHQGSSIPVVHCDLKPSNVLLDENMVAHVSDFGISKLLDDGQSKAHTQTLATIGYVAPEYGSKGVISVKGDVYSFGIMLMEIFTGKKPTSEMFAEELTLKTWISESMHNSVVMEVVDKNLISQHGKEIHELLPHVSSIFVLALRCCEDLPEARVNMTEVTASLVKIKTLFTQ 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00586 634 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 8 120 - -
Mepo6g00586 634 Gene3D Ribonuclease Inhibitor 5 161 IPR032675 -
Mepo6g00586 634 SMART serkin_6 352 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00586 634 Pfam Leucine rich repeat N-terminal domain 8 51 IPR013210 -
Mepo6g00586 634 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 428 634 - -
Mepo6g00586 634 Gene3D Ribonuclease Inhibitor 162 227 IPR032675 -
Mepo6g00586 634 FunFam Predicted protein 121 216 - -
Mepo6g00586 634 SMART LRR_typ_2 198 222 IPR003591 -
Mepo6g00586 634 SMART LRR_typ_2 78 102 IPR003591 -
Mepo6g00586 634 SMART LRR_typ_2 174 197 IPR003591 -
Mepo6g00586 634 SMART LRR_typ_2 241 265 IPR003591 -
Mepo6g00586 634 SMART LRR_typ_2 126 150 IPR003591 -
Mepo6g00586 634 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Mepo6g00586 634 Gene3D Transferase(Phosphotransferase) domain 1 428 633 - -
Mepo6g00586 634 Pfam Protein kinase domain 353 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00586 634 FunFam Serine-threonine protein kinase plant-type 332 427 - -
Mepo6g00586 634 SUPERFAMILY Protein kinase-like (PK-like) 334 625 IPR011009 -
Mepo6g00586 634 SUPERFAMILY L domain-like 39 308 - -
Mepo6g00586 634 PANTHER OS04G0122200 PROTEIN 229 319 - -
Mepo6g00586 634 Pfam Leucine rich repeat 128 187 IPR001611 GO:0005515
Mepo6g00586 634 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 217 307 - -
Mepo6g00586 634 Gene3D Phosphorylase Kinase; domain 1 327 427 - -
Mepo6g00586 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Mepo6g00586 634 Gene3D Ribonuclease Inhibitor 228 326 IPR032675 -
Mepo6g00586 634 ProSiteProfiles Protein kinase domain profile. 352 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00586 Mepo-Chr6 6022630 6027596 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00586 67 632 Receptor kinase-like Gene Family AT3G47570 36.039 1.85e-110 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo6g00586 Pkinase 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00586 - K13420 mtr:25502863 560.836