Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00585 ATGGCCAAACTATGCTCTTATCTCATTTTTCTCTCACTCTCACTAAACTACTACTTCTTCACTTGCTTAGCTATGAGCAGAAAAAACATCACCACAGATGAATATTCACTTCTTGCATTCAAATCTTCCATTACGCTAGACCCTTATGATCTAATGGTTCATAACTGGTCAACCTCATCTTCTTTATGCAATTGGGTTGGTGTCACATGTGATGAACAACATGGTAGAGTCCATGCTTTGAATCTTAGTAACATGGGACTTAAAGGTACTATTTCCCCACAACTTGGGAATCTCTCGTTCCTTGTTCACCTTGATCTTCAAGGAAATGCTTTCAATGGTGAATTGCCACAATCGTTATTTCAGTTGCATCGATTGAAGTTGCTTAATTTGAGCAATAACATGCTTTCTGGAACCATACCTCAAATGATTTCCAACTTATCTTCACTTGAAGAAATTACTTTGGCTAATAACTCCTTGTCAGGAGAAATTCCAAAAGGGTTGAGTGATCTTACACAGCTGAGAACAATAGACTTTGGTTATAATGGTCTATCAGGCAATCTTCCATCAAATATTTGCAAAGGGCTTCCAAAACTTGGAATACTTGATATTTCTCATAATCATTTTTCTGGTGACATGCCTGCTGTTTGGCATCAATGTGAAAATTTGGAAAGGTTAATATTATCCAACAATGGTTTCAACAAAGGAACAATCCCAGAAGACATGGGAAACTTGAACAAGCTTCAACGTTTATATCTTAGTGGCAACAACTTGGAGGGTGGAATTCCGTTCTCCCTATACAACATTACTACTCTGAAGATTGTTAACATTAGTGGTAACAATTTAAATGGAATTCTACCAAGCGAGCTTTGTCATCCACTTCTTCCTCAACTTGAATGGTTTATTTTGGACGGTAATCAATTTGAAGGAAGAATTCCACGATCAATTGGAAACTGCACATTGTTAAAATCCTTGAGTTTGAACGATAATCATTTCACTGGTTCGATACCCGAGGAGATTGGCAATCTTGATCAACTTTCAAACCTACAATTGGCAAACAATAGATTGAGTGGGCATATTGCTTCAAAACTCTTCAACATTTCAACATTACGCTACTTGTCTCTCATAAACAATTGTCTCTCAGACAGTCTTCCAGTAGACATGGGGCGTAGCTTACCTAATCTGAAAGTACTACAATTACGTTATAACATGCTTGTGGGAAACATTCCACATGGTATAGCCAATGCTTCTATGCTCAAAGAAATAGACTTACAATACAATCAATTCAGTGGAACAGTACCTGATGTTTTTGGTGGTTTAAAACTTCTTGAATGTCTCCATTTAGATTTCAATAATAATTTGAAACTAGAGGATTCCTTTGGATTCAACTTCCTCACTTCATTGACAGGTTGTGGACAACTGAAATATTTGTCTGTATCAGGAACTCGTTTATCCAAACTTCCCAAGTCAATTGGAAACTTAACTGTAGGATACTTTTGGGCACAATCTTCCGGAATCAATGGTAATTTGCCATTGGAAATCGGAAACATGAGCAACCTGGTTCAATTATATCTGAGTGGGAATGATATAAATGGACCAATCCCTAGTACGACTAAAGGGCTGCATAACCTTCAAACTTTGTATCTTGATGACAATGGACTGCAAGGATCCATTGATGAGCTTTGTGAAATTAAGAGTTTGAGTGATGTGTATCTATCAAACAATAAATTTTCTGGAGCGTTGCCGACATGCTTAGGAAATATGACTTCTCTTAGCAAAGTTCACATAGGAGCTAATAGGTTTACTTCTGAAATACCTTCCTCGTTTTGGAATCTCAAAGATATTTTAGAGGTAAACTTATCCAACAATGCTTTCACTGGAAATCTTTCAATGGAGATTGGTAAACTGAGGGCAATTACGCTATTAAATCTGTCTGGAAATCAGATTTCAAGCAACATTCCTGATACCATAGGTTTATTAAAAACTTTGAGCTTCTTGGACTTGTCCCATAATCTTCTTACTGGTGTCATTCCAAAATCCTTAGGGGACCTTGTCAGTCTTGAAAGTATCAACTTGTCATACAATATGTTACAAGGAGAGATTCCTAGTGGAGGACGATTCAAAAATTTCACAGCTCAATCTTTAATGCATAATAAAGCCCTCTGCGGTAATCCTCTTCTACAAGTACCTCCATGTGATAAACATAGAAGATCAATCGCAAAGACGATATTGATCAAATGCATGCTGCCCATAATTGTGTCAGCCATTTTAGTTGCTGGATGCATTATACTTGTACTACACAAAAGGAAAAAAGATGAAAGTCAACATAAAAGTGATTTATCAACTATAGGAGTTCCGAAAAGAATTTCCTATTATGAACTTGTGCAAGCAACTAGTGGTTTCAGTGAGAGTAATTTACTTGGAAAGGGTGGCTTTGGATCTGTGTATCAAGGGTTGCTGTCTAGTGGGGAGATGGTTGCAGTTAAAGTAATTGATTTAAACTTCAAAGCAACATCACGGAGTTTTGATGTAGAATGCAACGCAATGCGCAATCTACGACATCGAAATCTTGTTGAAATTATTAGTAGTTGTTCAAATGTTGATTTCAAATCTTTGGTGATGAAGTTCATGTCAAATGGAAGTGTGGAAAAATGGTTATACTCATATAACTGTTGTTTAGATTTCTTGCAAAGGTTGAATATAATGATAGATGTGGCATCTGCATTGGAGTATCTCCATCATGGTTCTTCAATACCAGTGGTTCATTGCGATCTAAAACCTAGTAATGTTTTACTAGACAAAAACATGGTTGCACATGTTAGCGATTTTGGCATTGCCAAACTCTTGGATGATGGACGGTCTAAAATTCATACCGAAACTTTAGCTACTCTTGGTTACGTCGCACCAGAGTATGGTTCTAAGGGCGTTGTTTCTATTAAGGGAGATGTGTACAGCTATGGGATTATGCTTATGGAGATATTCACAAGAAAGAGGCCAACAGATGAAATGTTTGCAGCAGAATTAACTTTGAAAACTTGGATCAGTAAATCTATGCCTAATTCAGTTATGGAAGTTGTGGATTCCAAATTAGTTCAGGAACATGAAAAAACAATTAATGACATTGTGTCTCATATATCATCTATTTTGGCTTTAAGCTTGAGTTGTTGCGCGGATTCACCTGAAGAGCGAGTTAACATGATAGAAGTCACTGCATCATTAATCAAAATCAAGACCTTATTCCTCCAAGAGAAGGGATATGAAGATGAGAAATTAGGTTTGTGA 3279 0.3684 MAKLCSYLIFLSLSLNYYFFTCLAMSRKNITTDEYSLLAFKSSITLDPYDLMVHNWSTSSSLCNWVGVTCDEQHGRVHALNLSNMGLKGTISPQLGNLSFLVHLDLQGNAFNGELPQSLFQLHRLKLLNLSNNMLSGTIPQMISNLSSLEEITLANNSLSGEIPKGLSDLTQLRTIDFGYNGLSGNLPSNICKGLPKLGILDISHNHFSGDMPAVWHQCENLERLILSNNGFNKGTIPEDMGNLNKLQRLYLSGNNLEGGIPFSLYNITTLKIVNISGNNLNGILPSELCHPLLPQLEWFILDGNQFEGRIPRSIGNCTLLKSLSLNDNHFTGSIPEEIGNLDQLSNLQLANNRLSGHIASKLFNISTLRYLSLINNCLSDSLPVDMGRSLPNLKVLQLRYNMLVGNIPHGIANASMLKEIDLQYNQFSGTVPDVFGGLKLLECLHLDFNNNLKLEDSFGFNFLTSLTGCGQLKYLSVSGTRLSKLPKSIGNLTVGYFWAQSSGINGNLPLEIGNMSNLVQLYLSGNDINGPIPSTTKGLHNLQTLYLDDNGLQGSIDELCEIKSLSDVYLSNNKFSGALPTCLGNMTSLSKVHIGANRFTSEIPSSFWNLKDILEVNLSNNAFTGNLSMEIGKLRAITLLNLSGNQISSNIPDTIGLLKTLSFLDLSHNLLTGVIPKSLGDLVSLESINLSYNMLQGEIPSGGRFKNFTAQSLMHNKALCGNPLLQVPPCDKHRRSIAKTILIKCMLPIIVSAILVAGCIILVLHKRKKDESQHKSDLSTIGVPKRISYYELVQATSGFSESNLLGKGGFGSVYQGLLSSGEMVAVKVIDLNFKATSRSFDVECNAMRNLRHRNLVEIISSCSNVDFKSLVMKFMSNGSVEKWLYSYNCCLDFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDKNMVAHVSDFGIAKLLDDGRSKIHTETLATLGYVAPEYGSKGVVSIKGDVYSYGIMLMEIFTRKRPTDEMFAAELTLKTWISKSMPNSVMEVVDSKLVQEHEKTINDIVSHISSILALSLSCCADSPEERVNMIEVTASLIKIKTLFLQEKGYEDEKLGL 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00585 1092 PANTHER OS04G0122200 PROTEIN 295 387 - -
Mepo6g00585 1092 SUPERFAMILY Protein kinase-like (PK-like) 777 1072 IPR011009 -
Mepo6g00585 1092 Gene3D Ribonuclease Inhibitor 456 738 IPR032675 -
Mepo6g00585 1092 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Mepo6g00585 1092 Gene3D Phosphorylase Kinase; domain 1 762 875 - -
Mepo6g00585 1092 Pfam Protein kinase domain 801 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00585 1092 Gene3D Ribonuclease Inhibitor 223 455 IPR032675 -
Mepo6g00585 1092 SUPERFAMILY RNI-like 79 405 - -
Mepo6g00585 1092 SUPERFAMILY RNI-like 390 711 - -
Mepo6g00585 1092 SMART LRR_sd22_2 342 368 - -
Mepo6g00585 1092 SMART LRR_sd22_2 170 189 - -
Mepo6g00585 1092 SMART LRR_sd22_2 122 148 - -
Mepo6g00585 1092 SMART LRR_sd22_2 540 562 - -
Mepo6g00585 1092 SMART LRR_sd22_2 659 680 - -
Mepo6g00585 1092 SMART LRR_sd22_2 244 265 - -
Mepo6g00585 1092 Pfam Leucine rich repeat 196 257 IPR001611 GO:0005515
Mepo6g00585 1092 Pfam Leucine rich repeat 101 159 IPR001611 GO:0005515
Mepo6g00585 1092 Pfam Leucine rich repeat 638 696 IPR001611 GO:0005515
Mepo6g00585 1092 Pfam Leucine rich repeat 392 451 IPR001611 GO:0005515
Mepo6g00585 1092 Gene3D Ribonuclease Inhibitor 145 222 IPR032675 -
Mepo6g00585 1092 ProSitePatterns Protein kinases ATP-binding region signature. 806 828 IPR017441 GO:0005524
Mepo6g00585 1092 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 454 735 - -
Mepo6g00585 1092 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 217 453 - -
Mepo6g00585 1092 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 876 1084 - -
Mepo6g00585 1092 FunFam Serine-threonine protein kinase plant-type 781 875 - -
Mepo6g00585 1092 SMART serkin_6 800 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00585 1092 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 30 193 - -
Mepo6g00585 1092 Gene3D Transferase(Phosphotransferase) domain 1 876 1088 - -
Mepo6g00585 1092 SMART LRR_typ_2 244 265 IPR003591 -
Mepo6g00585 1092 SMART LRR_typ_2 294 318 IPR003591 -
Mepo6g00585 1092 SMART LRR_typ_2 195 218 IPR003591 -
Mepo6g00585 1092 SMART LRR_typ_2 98 122 IPR003591 -
Mepo6g00585 1092 SMART LRR_typ_2 683 707 IPR003591 -
Mepo6g00585 1092 SMART LRR_typ_2 146 169 IPR003591 -
Mepo6g00585 1092 SMART LRR_typ_2 659 682 IPR003591 -
Mepo6g00585 1092 SMART LRR_typ_2 342 366 IPR003591 -
Mepo6g00585 1092 SMART LRR_typ_2 540 563 IPR003591 -
Mepo6g00585 1092 SMART LRR_typ_2 470 493 IPR003591 -
Mepo6g00585 1092 SMART LRR_typ_2 635 658 IPR003591 -
Mepo6g00585 1092 SMART LRR_typ_2 391 415 IPR003591 -
Mepo6g00585 1092 SMART LRR_typ_2 170 194 IPR003591 -
Mepo6g00585 1092 ProSitePatterns Serine/Threonine protein kinases active-site signature. 919 931 IPR008271 GO:0004672|GO:0006468
Mepo6g00585 1092 Gene3D Ribonuclease Inhibitor 32 144 IPR032675 -
Mepo6g00585 1092 ProSiteProfiles Protein kinase domain profile. 800 1080 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00585 Mepo-Chr6 5997531 6002903 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00585 32 1081 Receptor kinase-like Gene Family AT3G47570 34.160 4.81e-176 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo6g00585 Pkinase 3.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00585 - K13420 mtr:25481440 1110.9