Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00583 ATGGGTCTAGATGAGAGTGAAGTTAGAGTTGAGGTTTTGGATTCCGTTCGTGACGTGATTGATGAGGATTTGAGTAATTTGGTTGAAGGGGTTGGAGAAGTTGGAACTTCAAGAGAGGTTGATAATGATTCTGGATCCAATAAGGTGGAGGATGAAGAAGTTAAGATTCAGGAAAAGTGTGATGAATTGGTTGATCAAGGAACTAGTTGTAATTCAAGCAATTTGGTGAATCAAGAAGTGGTTGAAAGAGTGATTGTTATAGAGTCTGCTCATGTTCAGAGTGAGTGTGTTAATGGAGAGGCGAGGAAATTAGAAGCAAAAGCTGATGAGTCAGGGCTTAGTTTGGTTTCGATGAAAGTGGCGAAAGGGGTGTCTGAAACTGATAAAGATTCATGTGTGATTGATATGAAGTGTAGCAGCCACAAAGGGTTTTATGAGAGCTCACAAGGTGAAAGGGTTTGTAGGATTTGTCATCTGGCTTTTGGGCAGGCATCGGATGCAACGGCTGTTGAAAATGCTAGTGCTGCAAGTGGAGATTTAATTCAGCTCGGTTGTGCGTGTAAAGACGAGCTTGGCATTGCACATGTTCATTGTGCTGAGGTGTGGTTCAAGCTTAAGGGAAACAGGTTATGTGAAATATGCGGAGAGACTGCAAAAAATGTTTCGGGTGTTGCTAGTAATGGATTTATGGAAGAGTGGAATGATAGAAGATTCATGGATAACGACGATAACTCATCCCGCAGGTTTGGTGGATGCTGGCGAGGACAGCCATTTTGTAATTTCTTAATGGCGTGCCTGGTAATAGCTTTCATTCTGCCATGGTTTTTTCATGTAGATATGTTCTAG 846 0.4196 MGLDESEVRVEVLDSVRDVIDEDLSNLVEGVGEVGTSREVDNDSGSNKVEDEEVKIQEKCDELVDQGTSCNSSNLVNQEVVERVIVIESAHVQSECVNGEARKLEAKADESGLSLVSMKVAKGVSETDKDSCVIDMKCSSHKGFYESSQGERVCRICHLAFGQASDATAVENASAASGDLIQLGCACKDELGIAHVHCAEVWFKLKGNRLCEICGETAKNVSGVASNGFMEEWNDRRFMDNDDNSSRRFGGCWRGQPFCNFLMACLVIAFILPWFFHVDMF 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00583 281 PANTHER ZINC FINGER, RING-CH-TYPE 41 281 - -
Mepo6g00583 281 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 137 226 IPR013083 -
Mepo6g00583 281 Pfam RING-variant domain 154 214 IPR011016 GO:0008270
Mepo6g00583 281 ProSiteProfiles Zinc finger RING-CH-type profile. 146 221 IPR011016 GO:0008270
Mepo6g00583 281 SUPERFAMILY RING/U-box 149 217 - -
Mepo6g00583 281 SMART ringv_2 153 215 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00583 Mepo-Chr6 5981862 5984702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00583 134 280 C3H Transcription Factor Family AT5G05830 40.000 7.03e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00583 - - gmx:100776373 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00583 6 5981862 5984702 Mepo6g00583 6 5981862 5984702 ECH