Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00577 ATGCAACCAAGAAGAAGAAAAATGAAACCCTTTTGTAGGTTCTTGATTCTTCTAACACTTATTACTCTCACACAATCATCATCTTCATGCAACAATGAAAACAAGAACCTTATATTAAAGGCTTTTCAATCTGTCTCAGGATTCAACACTTCCTTATTCCAAACAAAAAGCTTCTTCAACTGTTCAAAGGGTGAAATTAACATCATAGAACTTCCATCAAAAAACTTGAGTGGCAACATCTCATGGAGATATCTAAGAAACATGACAAACTTAAAGTTTCTTGATCTTTCAGGTAATTATCTACAAGGTCAAGTACCAAACTGGTTTTGGTCAAGTAGTTCAAATTTATCAACAGTGAATCTCTCAAATAATAGATTTGGTGGAACCATTGCATTCAAAACAAAACCCATTTCTCAAAATGGTTCAAATTTCAGATTTTCTTCACTACAAAATCTCAATCTTTCAAACAACAGGTTCACAAATCAACTTCATCTTTCATTTTTTCAAAACCTTAAAATCCTTGACCTTTCAGACAACAACCTTAACACTCTACCTTCAGGTTTTCAAAACCTTACCAAACTCAACTACCTTGATCTATCAAACTGTAACATCATAGGAAACATCAAACCCATTTCTTATCTCACTTCACTCTCTTTCTTAAACCTTTCAAACAACTCTTTGAATGGTAGTTTCCCTTCTGATTTTCCATCTCTAAACAACCTTAAATTCCTCAACATCTCAAACAACAATTTCAATTCTTCAACTTCTCTAAACAACTTCATCAAGAAATTTGGAAAATCATCATTCATTCATAACCACTTCAATCTCAACCACTACAATACAACCAAAAAACCAAATATTCATTCAAATTCAATTTCAACTATACAACATCACCACCATCAACAACTTCATGTGACAAAGACAAAACCCATTCAAACCAAACCAAAACACAAACAAAAGTCAAAAACAAAAACCATGATTATTGTAGCAGTTACCTCGGCGTCAACGCTTATTTTTGTCGTATTATGTCTATGTACATTTTTTGGTTACAGAAGAAAAAGAAAACTAGCTCAAAAAAACAAATGGGCAATTTCAATATCAAAACCAATGACAGGATTAACAACAACCGTTAAGATGGAGAAATCTGGACCGTTTGCATTTGAGACAGAATCTGGAACATCATGGGTAGCTGATCTAAAAGAACCAACTTCAGCATCAGTTGTGATGTTTGAGAAACCTTTGATGAACATTAGTTTCATGGATCTTATGAATGCCACGTCATATTTTGGGAAAGATTCTCAGCTAGCTGAAGGTAGATGTGGGCCCGTTTATCGTGCTGTTTTACCTGGGGAGTTACACGTGGCAATTAAGGTTCTTGAAAATGCTAGAGAGGTTGATCATGATGATGCTGTTGATACTTTTGTTGACTTGTCTAAGCTTAAACATCCTAATCTCTTGCCACTTTCTGGTTACTGCATAGCAGGGAAGGAAAAGCTAGTGTTGTATGAGTTTATGTCAAACGGAGATTTAGGGAGATGGCTGCACGAGCTACCGACGGGTGAGACTAATGTGGAGGACTGGAGTAGCGACACATGGGAGATTCAAAACGGCACCGGTTCACGAGCATCCTCACCAGAAAAAATGGGTTGGCCAACACGACACCGTATTGCTCTAGGAGTAGCGCGTGGTCTAGCATTTCTTCACCATGCAGGATCAAGGCCCGTCGTTCACGGACATCTAGTAACATCAAACGTCCTACTAGCCGATGACTTTGAGCCTCGAATTGCTGATTTTGGGTTTCGAAAATTCGGACAACAATGTCCTCCAAATTGCAGCACTGAAACAGACGTTTACTGTTTCGGTGTAGTGCTTATGGAGCTTCTAACCGGGAAGCCCGGTACAGCAGAGACGGTGGTTTGGGTGAGGAAGCTTGTAAGAGAAGGTCATGGAGTGAGGGCGCTTGACGATAGACTCAAACTAAATGGTGGTGACTCAGAGAGTCAAATGGTGGAGAGTCTCCGAGTTGCGTACCTTTGTACGGCCGAGTCACCTGGGAAGAGGCCAACTATGCAGCAAGTTTTGGGCCTTCTCAAAGATATTCATCCAAAAAATGGACTCGAATGA 2124 0.3879 MQPRRRKMKPFCRFLILLTLITLTQSSSSCNNENKNLILKAFQSVSGFNTSLFQTKSFFNCSKGEINIIELPSKNLSGNISWRYLRNMTNLKFLDLSGNYLQGQVPNWFWSSSSNLSTVNLSNNRFGGTIAFKTKPISQNGSNFRFSSLQNLNLSNNRFTNQLHLSFFQNLKILDLSDNNLNTLPSGFQNLTKLNYLDLSNCNIIGNIKPISYLTSLSFLNLSNNSLNGSFPSDFPSLNNLKFLNISNNNFNSSTSLNNFIKKFGKSSFIHNHFNLNHYNTTKKPNIHSNSISTIQHHHHQQLHVTKTKPIQTKPKHKQKSKTKTMIIVAVTSASTLIFVVLCLCTFFGYRRKRKLAQKNKWAISISKPMTGLTTTVKMEKSGPFAFETESGTSWVADLKEPTSASVVMFEKPLMNISFMDLMNATSYFGKDSQLAEGRCGPVYRAVLPGELHVAIKVLENAREVDHDDAVDTFVDLSKLKHPNLLPLSGYCIAGKEKLVLYEFMSNGDLGRWLHELPTGETNVEDWSSDTWEIQNGTGSRASSPEKMGWPTRHRIALGVARGLAFLHHAGSRPVVHGHLVTSNVLLADDFEPRIADFGFRKFGQQCPPNCSTETDVYCFGVVLMELLTGKPGTAETVVWVRKLVREGHGVRALDDRLKLNGGDSESQMVESLRVAYLCTAESPGKRPTMQQVLGLLKDIHPKNGLE 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00577 707 ProSiteProfiles Leucine-rich repeat profile. 170 192 IPR001611 GO:0005515
Mepo6g00577 707 Gene3D Phosphorylase Kinase; domain 1 389 504 - -
Mepo6g00577 707 SUPERFAMILY RNI-like 70 263 - -
Mepo6g00577 707 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 65 700 - -
Mepo6g00577 707 SMART LRR_typ_2 168 190 IPR003591 -
Mepo6g00577 707 SMART LRR_typ_2 214 238 IPR003591 -
Mepo6g00577 707 SMART LRR_typ_2 88 111 IPR003591 -
Mepo6g00577 707 PRINTS Leucine-rich repeat signature 171 184 - -
Mepo6g00577 707 PRINTS Leucine-rich repeat signature 214 227 - -
Mepo6g00577 707 ProSiteProfiles Leucine-rich repeat profile. 148 169 IPR001611 GO:0005515
Mepo6g00577 707 Pfam Protein tyrosine and serine/threonine kinase 432 602 IPR001245 GO:0004672|GO:0006468
Mepo6g00577 707 ProSiteProfiles Leucine-rich repeat profile. 193 215 IPR001611 GO:0005515
Mepo6g00577 707 Gene3D Ribonuclease Inhibitor 138 326 IPR032675 -
Mepo6g00577 707 SUPERFAMILY Protein kinase-like (PK-like) 407 697 IPR011009 -
Mepo6g00577 707 Gene3D Transferase(Phosphotransferase) domain 1 608 704 - -
Mepo6g00577 707 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Mepo6g00577 707 ProSiteProfiles Protein kinase domain profile. 429 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00577 707 Gene3D Transferase(Phosphotransferase) domain 1 505 607 - -
Mepo6g00577 707 Pfam Leucine rich repeat 148 204 IPR001611 GO:0005515
Mepo6g00577 707 FunFam Putative LRR receptor-like serine/threonine-protein kinase 390 504 - -
Mepo6g00577 707 Gene3D Ribonuclease Inhibitor 22 137 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00577 Mepo-Chr6 5918599 5922491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00577 68 700 Receptor kinase-like Gene Family AT5G07280 30.312 8.43e-68 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Mepo6g00577 PK_Tyr_Ser-Thr 1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00577 - - gmx:100778920 912.138