Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00575 ATGGCAGACGTGCTTTTACACAAGGTGAAAACATCATCAAACAAAAAAGATAAGGAAACATCGACTCTCTTATTGGGTCGTTTCGAAGTTGGAAAACTTCTTGGCCATGGAACATTTGCAAAGGTTTACTATGCAAAAAACATCAAAACCGATGAAGGTGTTGCAATCAAAGTGATAGACAAGGAGAAGATTCTTAAGGGTGGTTTGGTTGCTCATATCAAACGTGAGATCTCAATTCTTCGCCGTGTTCGACACCCGAATATCGTTCAATTGTTTGAGGTAATGGCTACAAAAACAAAGATCTATTTTGTTATGGAATATGTTCGTGGGGGTGAGCTTTTTAACAAGGTTGCTAAGGGTAGGTTGAAAGAAGAGGTTGCTAGAAAGTATTTTCAACAATTGATTTCTGCTGTTGGATTTTGTCATGCTCGAGGTGTTTATCATAGGGATCTTAAGCCTGAAAATTTGTTGCTTGATGAGAATGGTAATTTGAAAGTGTCTGATTTTGGTTTGAGTGCCGTTTCTGATCAAATTAGACAAGATGGTTTGTTTCATACTTTTTGTGGTACTCCTGCTTATGTTGCACCTGAGGTTTTGGCTAGGAAAGGTTATGATGGTGCAAAGGTTGATCTTTGGTCTTGTGGTGTTGTTTTGTTTGTTTTGATGGCTGGTTATTTACCTTTTCATGATCAAAATGTTATGGCAATGTATAAGAAGATTTACAAGGGTGAATTTCGGTGTCCTAGGTGGTTTTCACCGGATTTATCCAAACTGCTTGTTCGTCTTCTTGATACTAAGCCTGAAACTAGGATTGCTATACCTGATATTATGGAGAATAGGTGGTTTAAAAAAGGGTTCAAACAGATTAAGTTTTATGTTGAGGATGATAGGCTTTGTAATGTGGATGATGGTTTCGGTGACAATGATGATGATACTGCTTCAATAACATCTGTAGCATCGTTTTCTGATTACGCAGTTTCGGAATCTGATTCTGAGATTGAGACCAGAAGGAAAAATGCTCCTTTGCCTAGACCTGCTAGTTTGAATGCTTTTGACATTATTTCATTCTCACCTGGTTTTGATCTTTCTGGTTTGTTTGAGGAAAAAGGTGATGAGAATAGGATTGTGACTGCTGCACCGGTTTCAAAGATCATATCGAAATTGGAAGAGATTGCTCAATTGGTTAGTTTTACTGTGAGGAAGAAGGATTGCAGGGTTAGCTTGGAAGGTACAAGGGAAGGTGTGAAGGGACCACTGACTATTGCTGCTGAGATATTTGAACTAACACCTTCTTTGGTCGTTGTTGAGGTGAAGAAGAAAGGTGGGGACAGAGCTGAATATGAGAGATTTTGTAATGAAGAATTGAAACCTGGATTACAGAATTTGACGGTGGAGGAATCAGCAGCAGCTTCAGATTTGTCGCTGGAATCAGCAACTTCTTCAGCTTTGTCACTGCCTGAAGGGCCTTCCTTACTTCGCGTGCTTTCTGAACCAGTTCACAACTTTACTTCGGATGTTGAATCACCGATCTATACAGCTGAAGAGTGA 1548 0.3941 MADVLLHKVKTSSNKKDKETSTLLLGRFEVGKLLGHGTFAKVYYAKNIKTDEGVAIKVIDKEKILKGGLVAHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLISAVGFCHARGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDLWSCGVVLFVLMAGYLPFHDQNVMAMYKKIYKGEFRCPRWFSPDLSKLLVRLLDTKPETRIAIPDIMENRWFKKGFKQIKFYVEDDRLCNVDDGFGDNDDDTASITSVASFSDYAVSESDSEIETRRKNAPLPRPASLNAFDIISFSPGFDLSGLFEEKGDENRIVTAAPVSKIISKLEEIAQLVSFTVRKKDCRVSLEGTREGVKGPLTIAAEIFELTPSLVVVEVKKKGGDRAEYERFCNEELKPGLQNLTVEESAAASDLSLESATSSALSLPEGPSLLRVLSEPVHNFTSDVESPIYTAEE 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00575 515 FunFam Non-specific serine/threonine protein kinase 18 333 - -
Mepo6g00575 515 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 16 457 - -
Mepo6g00575 515 ProSiteProfiles Protein kinase domain profile. 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00575 515 CDD STKc_SnRK3 27 281 - -
Mepo6g00575 515 SUPERFAMILY Protein kinase-like (PK-like) 24 283 IPR011009 -
Mepo6g00575 515 FunFam Non-specific serine/threonine protein kinase 345 463 - -
Mepo6g00575 515 ProSiteProfiles NAF domain profile. 343 367 IPR018451 GO:0007165
Mepo6g00575 515 Pfam NAF domain 345 401 IPR004041 GO:0007165
Mepo6g00575 515 FunFam Non-specific serine/threonine protein kinase 19 107 - -
Mepo6g00575 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Mepo6g00575 515 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00575 515 SMART serkin_6 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00575 515 ProSitePatterns Protein kinases ATP-binding region signature. 34 57 IPR017441 GO:0005524
Mepo6g00575 515 Gene3D Kinase associated domain 1, KA1 343 464 - -
Mepo6g00575 515 Gene3D Transferase(Phosphotransferase) domain 1 18 339 - -
Mepo6g00575 515 CDD CIPK_C 349 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00575 Mepo-Chr6 5903180 5905308 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00575 10 491 CBL-interacting serine-threonine protein kinases AT4G18700 76.955 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mepo6g00575 Pkinase 3.7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00575 - - gmx:100790133 865.529