Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00573 ATGGAGAACAAAGCAACAATTCTAATGCATAAGTATGAGGTAGGACGCATGCTTGGCCAAGGAACTTTTGCCAAAGTTTACCATGCAAGGAACTTAAAGACAGGACAAAATGTTGCCATCAAGGTTTTCGACAAAGCGATGATCATGAGAGTCGGTTTGAAGGAGCAAATCAAGCGTGAAATCTCAGTGATGCGTCTTGTTCGACACCCCAACATTGTCGAATTCTACGAGGTCATGGCAAGCAAAACAAAGATATATTTTGCAATGGAACAAGTGAAAGGTGGTGAGCTTTTCCATAAAGTGTCCCGAGGGAAGCTGGGGGAAGATATGGCTAGGAAATATTTCCAACAACTTATTGCAGCTGTTGATCATTGTCATAGAAGAGGGATTTATCATCGCGACCTTAAACCAGAAAATCTTCTCCTCGACGAAAATGGTGACCTTAAAGTTGCTGATTTTGGTCTTAGTGCATTGTTGGAATCAAAAAAGAAAGATGATCTTCTTCATACAACATGTGGTACTCCAGCTTATGTAGCACCTGAGATTATCAAGAAGAAAGGTTATGATGGAGCCAAGGCAGATATTTGGTCTTGTGGTGTTATTCTCTATGTTCTATTGGCAGGTTTTCTTCCTTTCAATGATAGAAATTTAATGGAGATGTATAAGAAGATTGCAAATGCTGATTTCAAGTTTCCACAATGGTTTCATTCTGATGTGAGAAGGCTTCTTTATAGAATACTTGATCCTGATCCAAGAACAAGAATTACTATTAACAAGATTATGCAAAATAGTTGGTTTAGAAAAGGGTATAAACAGATTGAAGGACCACATTTATCGCCTACACACGGCGATATCTCAGATGTTCATAATGCATTTGATGATTTATCACCACCATCAAGTGCTTGTGGAACTCCAATGTTTGTTAAAGATGAAGAATGCCCAATGAAGCTATATTGTTTCAATGCATTTGATATCATATCACTCTCTTCGGGACTTGATCTTTCGGGTTTGTTTGAAAAAGATACGAGTGAAGGACAACATGCAAGATTTGCTACAAAAAGACCACCTTCAACAATTGTGTCAAAACTTGAAGAGACAGCACAATCAGTTGGTAGATTTAAGGTGATGAAGCAAAATGGGATTGTTAGAGTGGAGGGATTTGAGACAGGGATAAGTGAACAACTCACCATTGATACAGAAATTTTTGAAGTTACATCTTCATTTTATATTGTTGAGGTGAACAAAATTTCCGGAGACACATTGGAATATAGGAAATTCTGGAACCAGTACTTAAAGCCTTCTCTAAGTGAAATTGTTTGGGTTTCTTAA 1329 0.3777 MENKATILMHKYEVGRMLGQGTFAKVYHARNLKTGQNVAIKVFDKAMIMRVGLKEQIKREISVMRLVRHPNIVEFYEVMASKTKIYFAMEQVKGGELFHKVSRGKLGEDMARKYFQQLIAAVDHCHRRGIYHRDLKPENLLLDENGDLKVADFGLSALLESKKKDDLLHTTCGTPAYVAPEIIKKKGYDGAKADIWSCGVILYVLLAGFLPFNDRNLMEMYKKIANADFKFPQWFHSDVRRLLYRILDPDPRTRITINKIMQNSWFRKGYKQIEGPHLSPTHGDISDVHNAFDDLSPPSSACGTPMFVKDEECPMKLYCFNAFDIISLSSGLDLSGLFEKDTSEGQHARFATKRPPSTIVSKLEETAQSVGRFKVMKQNGIVRVEGFETGISEQLTIDTEIFEVTSSFYIVEVNKISGDTLEYRKFWNQYLKPSLSEIVWVS 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00573 442 SUPERFAMILY Protein kinase-like (PK-like) 8 283 IPR011009 -
Mepo6g00573 442 CDD CIPK_C 321 435 - -
Mepo6g00573 442 Gene3D Transferase(Phosphotransferase) domain 1 2 296 - -
Mepo6g00573 442 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00573 442 ProSiteProfiles NAF domain profile. 315 339 IPR018451 GO:0007165
Mepo6g00573 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Mepo6g00573 442 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Mepo6g00573 442 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00573 442 FunFam Non-specific serine/threonine protein kinase 5 304 - -
Mepo6g00573 442 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 429 - -
Mepo6g00573 442 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Mepo6g00573 442 Pfam NAF domain 320 377 IPR004041 GO:0007165
Mepo6g00573 442 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00573 442 Gene3D Kinase associated domain 1, KA1 315 441 - -
Mepo6g00573 442 FunFam Non-specific serine/threonine protein kinase 315 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00573 Mepo-Chr6 5892776 5894307 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00573 1 440 CBL-interacting serine-threonine protein kinases AT5G45820 61.712 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mepo6g00573 Pkinase 3.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00573 K07198 - gmx:100807927 643.654