Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00571 ATGGGAATGAGATGTAACACATTTGGATTTTGGTTTAGAGTTTATATTTGCTTCATTTCTGTTTGGGGAATCCGTAAGTGTTGGTCAATTAACGATGAAGGATTGGCTTTGTTGGAGTTTCATGCAAGAATAACATGTGATCCTTATGTTGCTTTGGAAAATTGGAATCCAAATGATTGTGACCCTTGCAACTGGTTTGGTGTCCACTGCGTCGATGGTAAAGTGCAGATGCTGGACCTAAATGGACTATCCTTGGAAGGGACATTGGCTCCTGAGCTTGGGAAACTTAGTCACTTAAAATCTCTTGTGTTATGCAGTAATAACTTTTCTGGTGACATTCCTAAAGAACTTGGAGATCTAGCTGAGCTAGAGTTATTGGATTTAAGGGATAATAATTTGTCAGGAAGCATCCCAGCAGAGCTTAGTAGAAGATTATCACTAAAACACTTGTTGCTTTGTTACAACAAAATAGAAGACAATGACTCTCAAGATCAAGGAAATTTCAGACTTCTCTTTAAATCACACCTTGATGATGATTGTTCATCCACTCTGACAGCATTATTTGCCTGCATCAATAGAAAGTTTGGTCACTGGTTCAAGCAGGGACCTGAAGAGAAATGTTTCGAGCTTCAGCCTCGTTCTAATGAGGCAAAGATTGAGATGAACATGCCAAATCCAATCAATTATGCGCGTCGTAAGTTACTCGATCAATCGAATAACCTTCCAGCCGCACCTTATAGTGGTGGATCTAAAACAGATTTCAGTAACCTTCCAATTAGCATTAGTAGTGGATCTTTTCCAGCTGTTCCAGATGCGAATAAGAAACAAAATCAGTCACATACACCATTGCCTTCTCCCTCGGATCCTTCACATGATGGAAAACAAGCAAGTCAAGAAAAATCCAAAACTTTTGGAAATTTTTGGAAGTATATAGTTATTATCATAGCTGTGGTTGTGTTGGTGATCGTGATCATAGTTCTTCTTTGCTTTTGGAAAAAACCAGCAGCTAAAATAATTAAACCTTGGAATACAGGAATAAGTGGACAGTTGCAAAAAGCTTTTGTAACAGGGGTTCCTAAGTTAAATAGAGCAGAACTAGAGACAGCTTGTGAGGATTTCAGCAATATTGTTACCAATGTTGAAGCGTGCACTATATACAAAGGAACACTGTCTAGTGGAGTTGAGATTGCAGTTGTTTCTGGTCTGATTAATTCTAGACAGGAATGGACTAAGAACATGGAATTGAACTACAGGAGAAAGATTGCGTCATTGTCCCGCATTAACCATAAGAACTTTGTTAATCTAATTGGATACTGTGAGGAAGAAGAACCATTCACAAGGATGTTTATATTTGAATATGCACCAAATGGAAGCCTATCTGAGCACCTACATGTTAAAGAAGTTGAACGTCTTAATTGGAGTGAAAGGGTAAGGATTATAATGGGAACTGCCTATTGTCTGCAATACATGCACCATGAATTAAATCCACCAGTAGCTCATACCAAAGTTTCTTCACATGTGGTCACGTTGACAGATGATTTTGCTACAAAGCTTGCGGAGATCACATTTAGAAGTATCGTAGAACCAGCTAAGTCAAGTATTAGAGGCGATTCAAAGAAATATGAGATGCTCCGTGCTGGTCTTGACCAAAATGTCTATGATTTTGGAATATTGTTGCTAGAAATCATTTCTGGTAAATTGCCTCATTCTGAAGAGCAAGGAAATCTTGTGCACTGGGCTGCTGAGTTCTTACATGACAAGAGAAGCATAGGCTACATGATTGATCCAAGTCTGCAATCATTCAAGGACAATGAACTTGATGTAATTTGTGAAGTGATTCAAGGGTGCATCCAACCTGATCCAAAGATGAGACCTACAATGAGAGACATAACTTCCAGATTAAGGGAAGTGCTTGGTGTAACACCTGAGCAAGCTGTTCCAAGACTTTCACCACTATGGTGGGCTGAACTTGAGATATTATCAGTGGAGGCTACTTAA 1998 0.3899 MGMRCNTFGFWFRVYICFISVWGIRKCWSINDEGLALLEFHARITCDPYVALENWNPNDCDPCNWFGVHCVDGKVQMLDLNGLSLEGTLAPELGKLSHLKSLVLCSNNFSGDIPKELGDLAELELLDLRDNNLSGSIPAELSRRLSLKHLLLCYNKIEDNDSQDQGNFRLLFKSHLDDDCSSTLTALFACINRKFGHWFKQGPEEKCFELQPRSNEAKIEMNMPNPINYARRKLLDQSNNLPAAPYSGGSKTDFSNLPISISSGSFPAVPDANKKQNQSHTPLPSPSDPSHDGKQASQEKSKTFGNFWKYIVIIIAVVVLVIVIIVLLCFWKKPAAKIIKPWNTGISGQLQKAFVTGVPKLNRAELETACEDFSNIVTNVEACTIYKGTLSSGVEIAVVSGLINSRQEWTKNMELNYRRKIASLSRINHKNFVNLIGYCEEEEPFTRMFIFEYAPNGSLSEHLHVKEVERLNWSERVRIIMGTAYCLQYMHHELNPPVAHTKVSSHVVTLTDDFATKLAEITFRSIVEPAKSSIRGDSKKYEMLRAGLDQNVYDFGILLLEIISGKLPHSEEQGNLVHWAAEFLHDKRSIGYMIDPSLQSFKDNELDVICEVIQGCIQPDPKMRPTMRDITSRLREVLGVTPEQAVPRLSPLWWAELEILSVEAT 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00571 665 ProSiteProfiles Protein kinase domain profile. 336 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00571 665 FunFam Leucine-rich repeat receptor-like kinase 34 158 - -
Mepo6g00571 665 SUPERFAMILY L domain-like 30 168 - -
Mepo6g00571 665 Gene3D Phosphorylase Kinase; domain 1 347 453 - -
Mepo6g00571 665 Gene3D Ribonuclease Inhibitor 29 211 IPR032675 -
Mepo6g00571 665 MobiDBLite consensus disorder prediction 270 292 - -
Mepo6g00571 665 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Mepo6g00571 665 FunFam Inactive receptor-like serine/threonine-protein kinase 345 453 - -
Mepo6g00571 665 PANTHER PROTEIN MALE DISCOVERER 2 15 663 - -
Mepo6g00571 665 Pfam Protein tyrosine and serine/threonine kinase 385 634 IPR001245 GO:0004672|GO:0006468
Mepo6g00571 665 Gene3D Transferase(Phosphotransferase) domain 1 454 645 - -
Mepo6g00571 665 SUPERFAMILY Protein kinase-like (PK-like) 383 634 IPR011009 -
Mepo6g00571 665 MobiDBLite consensus disorder prediction 270 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00571 Mepo-Chr6 5881726 5885540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00571 27 639 Receptor kinase-like Gene Family AT2G42290 25.630 2.34e-48 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Mepo6g00571 PK_Tyr_Ser-Thr 7.9e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00571 - - adu:107468254 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00571 6 5881726 5885540 Mepo6g00571 6 5881726 5885540 ECH