Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00569 ATGTCAGAAGATGGACATGAGATTCATAACAATCAGAATGAGGACCAGCAGCTGGTTGAGGAAAGTAGTAATTCATCTGGTTCTTCTAAAAAATGGTCTTCCTTTGATTTGAATGAAGAAGCTACAAGTGAAGATAACAACCATGAAGCAACACTTGAGGAGAATGAGAATGAGAAGGAAAATGTTGAAGGTAATAATGAAAGAAGAGGCAAAGTTAGACATTATGTTAGATCCAAGATGCCTAGGTTAAGGTGGACTCCTGAGCTTCATCATTCTTTTTTGCATGCTGTTGACAGACTTGGTGGTCTAGAAAGAGCAACACCTAAGTTGGTGCTTCAGCTAATGAATGTGAGAGGACTCAACATTGCTCATGTCAAGTCTCACTTGCAGATGTATCGAAGCAAGAAACTTGACGAGTTCGGACAAGTACTATGCCAAACACAAAGGTCAACACAAGAAGTAGGAAGATCTCAGAAACTCGATCTAAGTCAACATTTTAAGATGGGTAATGGTGGTATTATTCTATCAAGTAGTTACAATGAGCCAACTCTCCTGCAGCCATGCCCTTCCTTCTCCCTATCACGTAATTATTCACATACAAACTCAACTCATCATGATGATTCAAGGCACCAACATTGGCATTTCAATCATCAACCTTTCAGATTTGCACCCGTGACACCAACCCAATTTCTTGAAGAGAAAAATTGGTCACCATTTGAAATCATGAACAATATTCATCAACCGGAATTCAAAAGGCTACTTTCCAATGTAACTTCTAAAACTTGGTCACAACCTATTGAGAAAGTTGAATGGAACAACACAAGTAGTACTATTACAAATAACACAGAATATCTATTGAAGTCCAAAGAACCTTGCAACTCTTCCACAAGTTTATTGTTACATTTTGAGGCCCCATTTCGGATCAAGTTGAATCAAGAGAAAGTACATAAAGACGAGAAAAGATTATTGCCTGATTTGCAACTAGGTTTGAGTCACACATATGGAACCAATGATGGTAAGATTGATCATTGCAGAGAGACCAAGGAAATTAGCACTAAGCTATCACTTTCTTAG 1074 0.3818 MSEDGHEIHNNQNEDQQLVEESSNSSGSSKKWSSFDLNEEATSEDNNHEATLEENENEKENVEGNNERRGKVRHYVRSKMPRLRWTPELHHSFLHAVDRLGGLERATPKLVLQLMNVRGLNIAHVKSHLQMYRSKKLDEFGQVLCQTQRSTQEVGRSQKLDLSQHFKMGNGGIILSSSYNEPTLLQPCPSFSLSRNYSHTNSTHHDDSRHQHWHFNHQPFRFAPVTPTQFLEEKNWSPFEIMNNIHQPEFKRLLSNVTSKTWSQPIEKVEWNNTSSTITNNTEYLLKSKEPCNSSTSLLLHFEAPFRIKLNQEKVHKDEKRLLPDLQLGLSHTYGTNDGKIDHCRETKEISTKLSLS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00569 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 137 IPR017930 -
Mepo6g00569 357 Coils Coil 38 65 - -
Mepo6g00569 357 NCBIfam myb-like DNA-binding domain, SHAQKYF class 81 136 IPR006447 GO:0003677
Mepo6g00569 357 MobiDBLite consensus disorder prediction 15 36 - -
Mepo6g00569 357 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 57 168 IPR046955 GO:0003700
Mepo6g00569 357 SUPERFAMILY Homeodomain-like 79 135 IPR009057 -
Mepo6g00569 357 MobiDBLite consensus disorder prediction 37 71 - -
Mepo6g00569 357 Pfam Myb-like DNA-binding domain 83 133 IPR001005 -
Mepo6g00569 357 Gene3D - 80 137 - -
Mepo6g00569 357 MobiDBLite consensus disorder prediction 1 73 - -
Mepo6g00569 357 FunFam Myb family transcription factor 79 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00569 Mepo-Chr6 5818496 5824269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00569 25 138 G2-like Transcription Factor Family AT2G42660 57.895 3.91e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo6g00569 Myb_DNA-binding 1.1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00569 - - mtr:25485972 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00569 6 5818496 5824269 Mepo6g00569 6 5818496 5824269 ECH
Mepo6g00569 6 5818496 5824269 Mepo2g04017 2 49175267 49178408 ECH
Mepo2g04017 2 49175267 49178408 Mepo6g00569 6 5818496 5824269 PCT