Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00559 ATGCCGGATTTTCGCCACGATTCTCTCACACCACCGTCACGCACCGTCCCCGTTCGCGAGGATTGTTGGTCAGAAGAAGCTTCCTCCACTCTCGTCGATGCATGGGGTCGTCGGTATCTTGAACTCAACCGTGGTAATCTTCGTCAGAAAGATTGGCAAGATGTTGCTGATGCTGTTAACGCTCTTCATGGTCATACCAAGAAAACTCATCGCACCGATGTTCAGTGTAAGAATCGAATCGATACGATTAAGAAAAAGTATAAGGTTGAGAAAGCTAGGGTTACGGAATCTAATGGTGTTTTTAATTCTAATTGGCCTTTTTTTGAACGGTTAGATGTTTTGATTGGACCTAATTTCAGTGCTAAGAAGTTATCAATTTCTTCACCGTTGGCGGTGACACCGTCGCCTCCGGTGGCTCTTCCGTTGATTCCTCATCGGAAATTTGCTAATTCTGGTGGTTATTCATCACCTGCAATTGCGGTACATTCCACCGCGGTGCCGTTACCGCAGAAGAGGAATTATTCTGCAGTGGCTGCGGCTACGGCTACGGTGATGGATGATGGGTATTTTAGGAGGAATTATTCTGCGGTAGCTGCAGCCGCTGCTGCTGCGGAAGCTGATGAGGATGATGATGAGGATGATGAGGTGGAGGAAGTTGAGGAGGAAGAGGTGGAAGTAGAGGAAGAGGAAGGGAGGGGGAGTGAAGTGGATGAAGGGGATAAAGGGAGAGAAGGGATGAAGAGGTTGGCGAAGGCGATAGAGAGTTTTGGTGAAATGTATGAGAGAGTGGAAGAACAGAAACTGAGGCAGATGGTGGATTTGGAGAAACAAAGGATGCAGTTTGCTAAAGATCTTGAAGTGCAGAGGATGCAGATGTTTATGGATACACAAGTTCAGCTGGAGAGAATTAAGCGTGGGAAACCATCTGGGTCTAATGATATGTATAATAGCTAG 954 0.4675 MPDFRHDSLTPPSRTVPVREDCWSEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKVEKARVTESNGVFNSNWPFFERLDVLIGPNFSAKKLSISSPLAVTPSPPVALPLIPHRKFANSGGYSSPAIAVHSTAVPLPQKRNYSAVAAATATVMDDGYFRRNYSAVAAAAAAAEADEDDDEDDEVEEVEEEEVEVEEEEGRGSEVDEGDKGREGMKRLAKAIESFGEMYERVEEQKLRQMVDLEKQRMQFAKDLEVQRMQMFMDTQVQLERIKRGKPSGSNDMYNS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00559 317 MobiDBLite consensus disorder prediction 204 234 - -
Mepo6g00559 317 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 12 307 IPR044823 -
Mepo6g00559 317 Gene3D - 23 89 - -
Mepo6g00559 317 Coils Coil 209 232 - -
Mepo6g00559 317 Coils Coil 246 266 - -
Mepo6g00559 317 FunFam trihelix transcription factor ASIL2 23 89 - -
Mepo6g00559 317 Pfam Myb/SANT-like DNA-binding domain 20 113 IPR044822 -
Mepo6g00559 317 MobiDBLite consensus disorder prediction 203 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00559 Mepo-Chr6 5743039 5748024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00559 19 317 Trihelix Transcription Factor Family AT3G14180 33.518 1.32e-49 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mepo6g00559 Myb_DNA-bind_4 7.1e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00559 - - mtr:25485964 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00559 6 5743039 5748024 Mepo6g00559 6 5743039 5748024 ECH