Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00547 ATGCCAACTCCTTCATCATCATCTTCTTCTATTTGGGTACTCTCTAACATAAAGCTTCAATTCTTTACTCGTATCAAACGGTTTCTTCAATCCAAAGCAACCCGAAAGCGCTGTGAATCCTCTGATTATTTAAACAAAGAAAAAAGCAGAGCCGAACAGAACAAGGTTGAACAGAACCAGGTTGAAAAGATTGAAACAGTGCAAGTTATAGAGAAGCATAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGAAGAAGGAGGTGGTGGAAGAAACTGAAATTTTGCTGCAAAAGACAGTGAAGATGCTTCACTTTGGAAGCTGGGAAGAGAAGGAGGTAGCAGCAAAAGAGATTGAAAGTTTAGTTAAAGAAGATGTTAAAGTAAGAAAGTTGATAACAGAACTTGGGGTGGTGCCGGTTTTGGTATCTATGGTGGCGTCGCAGGTGGTTAGTCACCAGAGAGCAGGGTTGACGGCGTTGATTTACCTAGCCGATGGAACTTACACGAACAAGGCTATGATAGTGGAGGCAGGAATATTGTCCAAATTACCTAAGACAATTGACCTTGTAGATGAGTCAACCATAAGTGAGTTTGCAGAGTTACTTTTATCATTATCATCACTTGCAAATACCCAATACCCTTTTCCTTCATTAGATTTTCTTCCATTTCTTAAAGACATTCTTAAAAAGGACATGACTTTTGATACCAAAAGATCATGTTTAGGAGCCTTATACAACCTTTCAACAATGTTAGAAAATGCAAGCCCTATAGTTTCTTATGGTCTTGTCCCAATCCTCTCAGAACTTTCCTTAGTCAAAGAAATTTCAGAAAAAGCTCTTGCTACTTTAGGTAACTTGTTGGTCACGTTAATGGGTAAAAAAGCAATAGAGAACAACTCAATGGTGCCACAAAATTTTGTTGAGATTTTGTCATGGGAAGATAAACCAAAATGTCAAGAGTTGTCGGTTTATGTTTTGATGATTTTAGCACATCAAAGTTCATCACAAAGAGATAAAATGGCACAAGCTAGGATTGTTCCTATACTTCTTGAAGTTGTTTTATTGGGGAGTCCTTTAGCTCAAAAGAGAGCAATGAAACTATTGCAATGGTTTAAAGATGAAAGACAAGTAAAGATGGGACCACATTCTGGTCCACAAACACCAAGATTTGGAATGGGGTCACCTTTAAATCAAAGAGATACAAATGAAGGGAAGAAATTGATGAAGAGTTTGGTGAAACAAAGCTTGCATAAGAATTTGGAAATAATAACTCAAAGGGCAAATGCAAATGGGGAGTCCTCCAAACTCAAGTCATTGGTTATTAGCACAAGTTCCAAGAGCTTGCCTTATTGA 1356 0.3842 MPTPSSSSSSIWVLSNIKLQFFTRIKRFLQSKATRKRCESSDYLNKEKSRAEQNKVEQNQVEKIETVQVIEKHKEEEEEEEEEKEKKEVVEETEILLQKTVKMLHFGSWEEKEVAAKEIESLVKEDVKVRKLITELGVVPVLVSMVASQVVSHQRAGLTALIYLADGTYTNKAMIVEAGILSKLPKTIDLVDESTISEFAELLLSLSSLANTQYPFPSLDFLPFLKDILKKDMTFDTKRSCLGALYNLSTMLENASPIVSYGLVPILSELSLVKEISEKALATLGNLLVTLMGKKAIENNSMVPQNFVEILSWEDKPKCQELSVYVLMILAHQSSSQRDKMAQARIVPILLEVVLLGSPLAQKRAMKLLQWFKDERQVKMGPHSGPQTPRFGMGSPLNQRDTNEGKKLMKSLVKQSLHKNLEIITQRANANGESSKLKSLVISTSSKSLPY 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00547 451 MobiDBLite consensus disorder prediction 380 402 - -
Mepo6g00547 451 SMART arm_5 168 208 IPR000225 GO:0005515
Mepo6g00547 451 SMART arm_5 250 289 IPR000225 GO:0005515
Mepo6g00547 451 SMART arm_5 126 166 IPR000225 GO:0005515
Mepo6g00547 451 Gene3D - 18 290 IPR011989 -
Mepo6g00547 451 Gene3D - 294 376 IPR011989 -
Mepo6g00547 451 Coils Coil 63 99 - -
Mepo6g00547 451 SUPERFAMILY ARM repeat 98 371 IPR016024 -
Mepo6g00547 451 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 11 451 - -
Mepo6g00547 451 MobiDBLite consensus disorder prediction 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00547 Mepo-Chr6 5627353 5630824 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00547 110 389 U-box Gene Family AT1G67530 30.556 4.48e-20 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00547 - - gmx:100813828 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00547 6 5627353 5630824 Mepo6g00547 6 5627353 5630824 ECH