Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00533 ATGGGTGGGGCTTGTGGATATGGTAACCTTTACAGTCAAGGGTATGGAACAAACACTGCTGCTTTGAGTACAACACTTTTCAGCAATGGTTTAAGCTGTGGCTTTTGCTATGAAATTAGGTGTGCTAATGACCAAAGATGGTGCCTTCCTGGTTCCATTGTGGTCACTGCCACAAATTTCTGTCCACCAAACAATGCTTTACCAAACAATGATGGTGGTTGGTGTAACCCTCCTCTCCAACATTTTGATCTTGCTCAACCTGTTTTCCTTCGTATTGCTCAATACAAGGCTGGAATTGTTCCTGTAGATTTTAGAAGGTAG 321 0.4268 MGGACGYGNLYSQGYGTNTAALSTTLFSNGLSCGFCYEIRCANDQRWCLPGSIVVTATNFCPPNNALPNNDGGWCNPPLQHFDLAQPVFLRIAQYKAGIVPVDFRR 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00533 106 Pfam Lytic transglycolase 19 103 IPR009009 -
Mepo6g00533 106 Gene3D - 1 106 IPR036908 -
Mepo6g00533 106 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 2 106 IPR007112 -
Mepo6g00533 106 PANTHER EXPANSIN-A15 1 106 IPR002963 GO:0009664
Mepo6g00533 106 SMART dpbb_1 19 104 IPR007112 -
Mepo6g00533 106 PRINTS Expansin signature 14 28 IPR002963 GO:0009664
Mepo6g00533 106 PRINTS Expansin signature 53 63 IPR002963 GO:0009664
Mepo6g00533 106 PRINTS Expansin signature 89 102 IPR002963 GO:0009664
Mepo6g00533 106 PRINTS Expansin signature 41 52 IPR002963 GO:0009664
Mepo6g00533 106 PRINTS Expansin signature 72 89 IPR002963 GO:0009664
Mepo6g00533 106 SUPERFAMILY Barwin-like endoglucanases 1 106 IPR036908 -
Mepo6g00533 106 CDD DPBB_EXPA_N 1 106 - -
Mepo6g00533 106 PRINTS Expansin/Lol pI family signature 1 19 IPR007118 GO:0005576
Mepo6g00533 106 PRINTS Expansin/Lol pI family signature 23 41 IPR007118 GO:0005576
Mepo6g00533 106 PRINTS Expansin/Lol pI family signature 97 106 IPR007118 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00533 Mepo-Chr6 5438380 5438845 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00533 1 106 Expansin Gene Family AT1G69530 86.792 1.49e-66 199