Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00521 ATGAATTTTTCTGCTCAAACTTGGAGGAATTCAGTTCCAAATCTTTTGCTATCGCTTCCACTAATAATCTCACTTCTTTTATTCAAATGTCTTGGTAATAGTTCCCAAACTACAACAAGTGTTGGTGTGATCATTGATGTTAATTCTGAAACAGGAAAACAACAGAGAATAGCTATGCAAATTGCAGCTCAAAGTTTCAATAATTATTCCAACACTTATAACATAATCCTTTTCTTCCGTGACTCTGGTAGGAACCCTTTACAAGCAGCTTCAGCTGCCGAAGATTTAATTACTAAAGAGAAAGTTAAAGTCATTATTGGCATGGAAACATGGCAAGAAGCTGCTATTGTTGCTGACTTTGGAGCCAAGTTTCAAATACCAACAATTTCATTTTCTTCTCCTCCATTAGTTTCTTCATCATCAATGCAACTTCGTTGGCCTTTCTTGATTCAAATGGCTCAAAATCAGTCTGCACAAATGAACTTCATAGCTGATATTGTCCATGGTTTCAACTCTCAAAAAGTTATAGCTATATATGAAGACAGTCCTTATAGTAGTGATTCGGGAATGGTAAACCTCTTATCGGAGGCTCTCGAAAAGGTTAACTCAAAGGTTGAGTATCGATTAGTTCTTCCACCATTCACTTCTTTATCAGATCCAAAAGGGTTTGTACTTGATGAACTGTTGAAGTTGTTGCAGCTCAAATCTCGTGTTTTTATTGTACTTCAAGCATCATTACCTATGGTGAACCATTTGTTTAGAGAAGCTAAGAAAATTGGATTGTTGGAGAAAGAATCAACTTGGATAATCAATGAGGAGATTACAAGCATGTTAGACTATGTAGATACATCTGTTTTATCTTCTATGGAAGGTGTTATGGGAATCGAAAGGAACTATTTTACAAGTTCTAGTGCTTATATTCAATTTCTGGAAAATTTCCAAGATGAGAATACAGATACAGTTGAGTCCAAACCAGGGTCAAATACTTTGCTAGCTTATGATAGCATTTCAGTTGTTACGAAGGCTTTGGAGAAAATGAATACTAATTTTAGTAGCTCAAAGACGTTATTGGAGGAAATGTTATCTTCCAATTTCAATGGTTTAAGTGGTAATATAAGATTCAAAGAAAGACAACTATCCTATACTCCAATGTTACGAGTCATAAAAGTGACGAATAATGCCAAGAAACATATTGAGTTTGACACTTGGACACCAAAGTTGAAGTTTTCTAGATCTCTTAAAGAGAGCACAAGTGATGGTACTACAGAAACTAAGACATGGAAAGTACCTACTGATGCAAACCCTTTAAAAGTTGCACTTCCTAGGAATCCTGCTTTTGATAACTTTTTGAAATTCTCCCAAAATCAACCTCCTACCGGTTTTTGTATTGAACTTTTCAAAGAGATCAGAGAAATTTTGAGTGGTCAATATTCTGATCTTCCCTATGAATTTTACTACGACTTCAATGGATCTTATGATGCACTTCTGGATAGAGTCATAGATGAGACCTATGATGCTATTGTAGGAGATGTAACAATACTTGCCAACCGATCAAGAAATGTATCATTCACTCAACCATATACCGAGTCAGGCTTATCACTCATACTTCCAGCAGAGATTGATGATTCAGCATGGTTGTTTATGAAGCCATTTAGCACAGAAATGTGGATTACTACTGTTGGTATCCTCATCTACACAATGATTATCATTTGGTTCTTGGAACATCACTTGAATCCTGAATTTGGTGGAACAGTGAAAACCCAGATCAGCACCACTATGTGGTTTGCTTTTACTTCTCTATTTTTTGCTCATAAGGAGAAAATAAACAGCAACTCAGCAAGAGTAGTAGTTGGAGTATGGTTATTTCTTGTGTTTGTTCTAACCTCAAGCTACACCGCAAGTCTTTCATCATTACTTACTATCCAAAAATTGAGGTCTGATAGAGATATTGAATGGGTTAAACAAAATAATCTATCAGTCGGTTGTAATAACAGAAGTACCTTTGCAAAGGACTACTTGGTCCAAGTGTACAATTTCCCTTGGCACCAAGTTGTAGATATTCAGGATGAACATGACGTTGTGGATAAATTCAAGAACAAAAAAATTTCTGCTTACATTGTTGAGAGTCCATATGCGAAGGTTTTCTTGACTAAGTACTGCAAAGGTTACACTGCAACTACAGCAGCCTATAAATTTGGAGGACTGGGATTTGTATTTCAAAAAGGGGATCCAATGGCAAAAAACTTTTCTGTAGCAATTTTAACACTAGCAGAAAATGGAAAACTAAAAGCTTTGGAAGATATTTGGTTAACACCTCATAAGGAATGCTCAAGCAACTCAGCATCTCCAGAAACTGAGAGCCTTACCCTTGACAAATTTTGGGGACTCTATTTCATATGTGCTGCCACTTCCACAATCTGCTTATTACTTGCTTTATTACAGAAGTACTTCTATAACCATAACAACTATGAAGAGGAAGCTCATCAACTTTCTCAAGGAAATGTAATCGCTGAACCTAATGTTGATAATAATCATCAACTTCCTCAAGGAAATGTAATCTCCGAATCTGATGATAATGACAATGTTTTGACGAGAGCATTTAGAAATGGTACAGGCTTATACATTGGAAATCTCACGCTTTTAAATAACGTTGCAACTTTTGGTGGATATGCTATTCAAGGGGTACGCCGTCGAAATTCACCAAGGTTGGAGAGTCTAAGCGTTTCTGATGAACCGGGCAATCTACAACGATCCCAATCAGCTGTCATAGAAATGATATAA 2781 0.3628 MNFSAQTWRNSVPNLLLSLPLIISLLLFKCLGNSSQTTTSVGVIIDVNSETGKQQRIAMQIAAQSFNNYSNTYNIILFFRDSGRNPLQAASAAEDLITKEKVKVIIGMETWQEAAIVADFGAKFQIPTISFSSPPLVSSSSMQLRWPFLIQMAQNQSAQMNFIADIVHGFNSQKVIAIYEDSPYSSDSGMVNLLSEALEKVNSKVEYRLVLPPFTSLSDPKGFVLDELLKLLQLKSRVFIVLQASLPMVNHLFREAKKIGLLEKESTWIINEEITSMLDYVDTSVLSSMEGVMGIERNYFTSSSAYIQFLENFQDENTDTVESKPGSNTLLAYDSISVVTKALEKMNTNFSSSKTLLEEMLSSNFNGLSGNIRFKERQLSYTPMLRVIKVTNNAKKHIEFDTWTPKLKFSRSLKESTSDGTTETKTWKVPTDANPLKVALPRNPAFDNFLKFSQNQPPTGFCIELFKEIREILSGQYSDLPYEFYYDFNGSYDALLDRVIDETYDAIVGDVTILANRSRNVSFTQPYTESGLSLILPAEIDDSAWLFMKPFSTEMWITTVGILIYTMIIIWFLEHHLNPEFGGTVKTQISTTMWFAFTSLFFAHKEKINSNSARVVVGVWLFLVFVLTSSYTASLSSLLTIQKLRSDRDIEWVKQNNLSVGCNNRSTFAKDYLVQVYNFPWHQVVDIQDEHDVVDKFKNKKISAYIVESPYAKVFLTKYCKGYTATTAAYKFGGLGFVFQKGDPMAKNFSVAILTLAENGKLKALEDIWLTPHKECSSNSASPETESLTLDKFWGLYFICAATSTICLLLALLQKYFYNHNNYEEEAHQLSQGNVIAEPNVDNNHQLPQGNVISESDDNDNVLTRAFRNGTGLYIGNLTLLNNVATFGGYAIQGVRRRNSPRLESLSVSDEPGNLQRSQSAVIEMI 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00521 926 PIRSF IGluLR_plant 12 866 IPR017103 -
Mepo6g00521 926 Gene3D - 697 777 - -
Mepo6g00521 926 Gene3D - 545 685 - -
Mepo6g00521 926 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 40 832 IPR015683 -
Mepo6g00521 926 SUPERFAMILY Periplasmic binding protein-like I 38 462 IPR028082 -
Mepo6g00521 926 Pfam Ligand-gated ion channel 772 802 IPR001320 GO:0015276|GO:0016020
Mepo6g00521 926 Pfam Bacterial extracellular solute-binding proteins, family 3 455 771 IPR001638 -
Mepo6g00521 926 Gene3D - 155 397 - -
Mepo6g00521 926 FunFam Glutamate receptor 159 325 - -
Mepo6g00521 926 SUPERFAMILY Periplasmic binding protein-like II 425 771 - -
Mepo6g00521 926 Gene3D - 431 544 - -
Mepo6g00521 926 FunFam Glutamate receptor 544 674 - -
Mepo6g00521 926 SMART GluR_14 437 772 IPR001320 GO:0015276|GO:0016020
Mepo6g00521 926 Gene3D - 46 382 - -
Mepo6g00521 926 Pfam Receptor family ligand binding region 57 392 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00521 Mepo-Chr6 5290901 5330032 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00521 25 822 Ion Channels AT2G29120 31.505 3.37e-119 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00521 - - mtr:11441834 1457.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00521 6 5290901 5330032 Mepo6g00521 6 5290901 5330032 ECH