Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00520 ATGAATTTTTATGCTCACACTTTGAAATCAGTTTTAAATATTTTGCTTCGGCTTCCTCTAATAATCTCACTTCTCCAATTACAGTGTCTTGCCAATAGTTCCCAAACTATAACAAGTGTTGGTGTGATCATTGATGTTAATTCTGAAACAGGGAAACAACAGAGAACAGCCATGCAAATTGCAGCTCAAAGTTTCAATAATTATTCCAACACTCATAACATAATCCTACTCTTCCGTGACTCTGGTAGAAACCCTTTACATGCAGCTTCAACTGCTGAAGAATTGATTACTAAAGAGAAAGTTAAAGTCATTATTGGCATGGAAACATGGCAAGAAGCAGCTATTGTTGCTGATGTTGGAGCCATGTTTCAAGTACCAACAATTTCGTTTTCTTCTCCGTTAGTCCCTTCATCATTAATGCAAATTCGTTGGCCATTCTTGATTCAAATGGCTCAAAATCAAACTGCACAAATGAAATTCATATCTGATATAATCCATGCTTTCAACTCTCAAAAGGTTATAGCTATTTATGAAGACAACCCTTATAATAGCGATTATGGAAGGTTAAGCCTCTTATCCGAGGCTCTCCAAAAGGTTAACTCGAAGATTGAGTATCAATTAATTCTTCCACCATTCACTTCTTTATCTGATCCAAAAGGGTTTGTTCTTGATGAGTTGTTGAAGTTGTTGCCCCTAAAATCTCGTGTTTTTATTGTACTTCAGGCATCATTACCGATGGTGAACCATTTGTTTAGAGAATCTAAGAAAATTGGATTATTGGAGAAAGAATCAACTTGGATAATCAATGAAGGGATTACAAGCATGTTAGACTATGTCGATAAATCTGTTTTATCTTTTATGGGAGGTGTTTTGGGAATCAAACACAACTATTCTACAAGTTCTAGTGATTATACTCAATTGCAGGAAAGTTTTCAAGCTGAGAACACAAAAACAGTTGAGTACAAACCAGGATTAAATGTTTTGTTAGCTTATGATAGCATTACAATTGTTACAAAAGCTTTGGAGAAAATGAATACTAATTCTACTAGCTCAAATATGTTATTGGAGGAATTGCTATCTTCAAATTTCAATGGCTTAATTGGTGATATAAGATTCAAAGAAAGAAAACTAACCTACATTCCAATGTTAAAAGTCATTAAAGTGGTTGATAATGATAAGAAAAATATTGAATTGGAGAGTTTGACACCAAAGTTTAAGATTGCTAGATCTCTTAAAAAGAAAACAGGTGATGGTGGTAAAGAAAGCTTAAATGACTCTGTACCTAAGACATGGAAAGTACCTACCAATACAAATCCTTTAAAAGTTGCAATTCCTATGCATCCTTCATCTGATAACTTTCTGAAAGTCTCTCAAAATCAACCTCCTACTGGTTTTTGTATCGATATTTTCAAAGAGATCAGAGAAATTCTGAGTGACCAGTATTCTGGTCTTCCGTATAAATTTTACCCTTTAAATGAATCTTACGATTCAATTCTGTTTAAAGTTGTGGATGAGACCTATGATGCTATTGTAGCAGATGTAACAATACTTGCTGAACGATCAAGGAATGTATCATTCACTCAACCATATACCGAGTCAGGTTTATCACTCATATTTCCAGCAGAAACTGAAACTTCAACATGGTTGATTATGAAACCATTTAGCTGGGAAATATGGATTGCAACTATTGGTATCCTCATCTACACAATGATTATCATTTGGTTCTTGGAACATCACTTGAATCCTGAATTTGGTGGACCATTGAAAACCCAGATCAGCACCACTATGTGGTTTGCTTTTTCGTCTCTATTTTTTGCTCATAAGGAGAAAATAAACAGCAATTCAGCAAGAGTAGTAGTTGGAGTATGGTTATTTCTTGTGTTTGTTCTAACCTCAAGCTACACCGCAAGTCTTTCATCGTTGCTTACTGTCCAGAAACTGAGGTCTGATAGAGACATTGAATGGCTTAAACAAAATAATCTATCAGTTGGTTGTGAAAACACCAGTACCTTTATAAAGGACTACTTGGTCCACGTGTACAATTTCCCTCGGCAACAAGTTGTAGATGTTCAGGATGTACATGACCTTGTGGATAAATTCAAGAACAAAAAAATTTCTGCACTCTTGCTTGAGAGTCCATATGAGAAGGTTTTCATGAATAAAAACTGCAAAGATTACACTACAACTACAGCAGCATATAAATTTGGAGGAATGGGATTTGTATTTCAAAATGGGGCACCAATGGCAAAAGACTTTTCTGTAGCAATTTTAACACTAGCAGAAAATGGAAAGCTAAAAGCTTTGGAAGAGATTTGGTTAACACCTTCTAAGGAATGCTCAAGCAACTCAGCATCTCCAGAAACTGAGAGCCTTACCCTTGACAAATTTTGGGGACTCTATTTCATATGTGCTGCCACTTCCACAATCTGCTTATTACTTGCTTTATTACAGAAGTACTTCCATAACCATAACCATAACAACTATGAAGAGGAAGCTCATCAACTTCCTCAAGGAAATGTAATCACCAAATCTGATGATGATAACAATCATCAACTCCCTGAAGGAAATGTAATCGCCGAATCTGATGATAATAACAATGTTTTGACGAGAGCATTTAGAAATGGTACAGGCTTATACATTGGAAACCTCCCGCCTTTAAATAACACTGCAACTTTTGGTGGATATGCTATTCAAGGTGTACGTCATCGAAATTCACCAAGGTTGGAGAGTGTAAGCATTTCTGATGAACCGGGCAATCCACAACGCTCCCAATCAGCTGACATAGAAATGATGTAA 2796 0.358 MNFYAHTLKSVLNILLRLPLIISLLQLQCLANSSQTITSVGVIIDVNSETGKQQRTAMQIAAQSFNNYSNTHNIILLFRDSGRNPLHAASTAEELITKEKVKVIIGMETWQEAAIVADVGAMFQVPTISFSSPLVPSSLMQIRWPFLIQMAQNQTAQMKFISDIIHAFNSQKVIAIYEDNPYNSDYGRLSLLSEALQKVNSKIEYQLILPPFTSLSDPKGFVLDELLKLLPLKSRVFIVLQASLPMVNHLFRESKKIGLLEKESTWIINEGITSMLDYVDKSVLSFMGGVLGIKHNYSTSSSDYTQLQESFQAENTKTVEYKPGLNVLLAYDSITIVTKALEKMNTNSTSSNMLLEELLSSNFNGLIGDIRFKERKLTYIPMLKVIKVVDNDKKNIELESLTPKFKIARSLKKKTGDGGKESLNDSVPKTWKVPTNTNPLKVAIPMHPSSDNFLKVSQNQPPTGFCIDIFKEIREILSDQYSGLPYKFYPLNESYDSILFKVVDETYDAIVADVTILAERSRNVSFTQPYTESGLSLIFPAETETSTWLIMKPFSWEIWIATIGILIYTMIIIWFLEHHLNPEFGGPLKTQISTTMWFAFSSLFFAHKEKINSNSARVVVGVWLFLVFVLTSSYTASLSSLLTVQKLRSDRDIEWLKQNNLSVGCENTSTFIKDYLVHVYNFPRQQVVDVQDVHDLVDKFKNKKISALLLESPYEKVFMNKNCKDYTTTTAAYKFGGMGFVFQNGAPMAKDFSVAILTLAENGKLKALEEIWLTPSKECSSNSASPETESLTLDKFWGLYFICAATSTICLLLALLQKYFHNHNHNNYEEEAHQLPQGNVITKSDDDNNHQLPEGNVIAESDDNNNVLTRAFRNGTGLYIGNLPPLNNTATFGGYAIQGVRHRNSPRLESVSISDEPGNPQRSQSADIEMM 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00520 931 Pfam Ligand-gated ion channel 775 805 IPR001320 GO:0015276|GO:0016020
Mepo6g00520 931 Gene3D - 153 300 - -
Mepo6g00520 931 Gene3D - 45 376 - -
Mepo6g00520 931 SUPERFAMILY Periplasmic binding protein-like I 40 393 IPR028082 -
Mepo6g00520 931 Gene3D - 691 781 - -
Mepo6g00520 931 Pfam Receptor family ligand binding region 55 388 IPR001828 -
Mepo6g00520 931 MobiDBLite consensus disorder prediction 908 931 - -
Mepo6g00520 931 SUPERFAMILY Periplasmic binding protein-like II 427 774 - -
Mepo6g00520 931 Gene3D - 434 547 - -
Mepo6g00520 931 Pfam Bacterial extracellular solute-binding proteins, family 3 458 774 IPR001638 -
Mepo6g00520 931 SMART GluR_14 441 775 IPR001320 GO:0015276|GO:0016020
Mepo6g00520 931 Gene3D - 548 686 - -
Mepo6g00520 931 PIRSF IGluLR_plant 9 872 IPR017103 -
Mepo6g00520 931 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 39 836 IPR015683 -
Mepo6g00520 931 FunFam Glutamate receptor 547 677 - -
Mepo6g00520 931 FunFam Glutamate receptor 157 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00520 Mepo-Chr6 5270664 5275309 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00520 24 830 Ion Channels AT2G29120 31.739 1.70e-120 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00520 - - mtr:11441834 1492.25