Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00519 ATGCATTACCTTTCAACTGTTACTCAACCACTTGCAAGAATATGGCTATTCTTTTTCTTACTCATCCCTTTTGCTCTCATTTACGGTATCCGAGATGAAACTATGAATTCAGAGAACAAAGTTATATCCATTGGGGTGATTATTGACGGTGATTCTCGTATTGGGAAAGAACAAGAAGTAGCCATGGACATTGCAGCCCAGAGCTACAACAACACTTCAAAGAACTACAAGTTAGCTCTCTACTTCAAGAACTCCACCAAGGATACCCTCAAGGCCATCAAAATTGCTGAAGAGATGATTAATGTGCAAAAGGTGCAAGTGATTATAGGGATGCAAACATGGCAAGAAGCAGCAATGGTGGCTGAAGTAGGAAGCAAAGCTCAAGTTCCTATCATATCCTTTGCAGCTCCTACCATTACCCCACCATTGATGGAAGTTCGGTGGCCTTTTCTGGTGAGACTAGCTAACACTGGTACAGCATATATAAAATGCATTGCAGAAATAGTGCAGGCTTATAGCTGGAAGAAAGTAGTAGTAATCTACGAAGATGACGGGTACGGTGGAGATTATGGGATGCTAGCTCTGCTAGCTGAGGCACTTCAGGATGTGGATTCAATGATCGAGCACCGCTTAGTCCTTCCACCAATTTCTTCTCTACAGGATCCAGAAGAGCTAGTTAGTGAAGAGATGCTAAAGTTAAAACAAACACAATCTCGGGTTTTCATAGTGCTGCAATCATCAGTAGAAATGGCAATTCATGTGTTCAAAGAAGCTTCAAAAGTTGGACTAGTGGATAAAGAATCAGTTTGGATGATCCCGGAGAGCATAACTAATTTGCTGGACTCTGTCAATAAGTCTGCTATTTCTTATATGGAAGGTGCTTTAGGAATTAAGACCTACTACTCGGAAAGAAGCAGGGAGTATAAAGGATTTGAGGCTCAATTCCGGAGAACGTTTTGGTCAAAGAATCCAGAGGAAGATAACCGATACCCAGGATTTTATGCTCTACAAGCATATGATAGCATTAACATTGTAACTCAAGCTTTGAACAGAATGACCAGTAGGAACAATAGAAGCCCAAAGACTTTACTAAGAGAAATACTTTCTTGCAATTTCCTTGGTTTAAGTGGCCATATTCAAATTGAATCTGGCCAACTCATTCAGAAGAATCTTGTCTTGAGGATAGTAAATGTGGCTGGGAAGAGTTACAAGGAATTATGCTTTTGGACTCAACAACATGGATTTACTACAATCCACCATGCAGGGCAAGGTGGAAATAAGGTTGCTGGAAATACAAAATGTTTCAGGGGTGTGCGGTGGCCTGGGAATTTGGCGCACGATCCAAAGGGATGGAACATGCCTACTGAAAAAAATCCATTGAGAATTGCAGTCAGAAGCAGAACCTCGTTTTCCAGGTTTGTCAAGGTTGACTATGACCAGAATGGAGAGCCTGAATATAGTGGATTCAGCATTGAAATTTTTGAGCAAGTACAAAAAGTTTTGGGGTACAATCTCCCATCTAGATATTATCCCATCAATGGAACCTATAATGATTTGGTTCAGCTTGTCTATAACAAGACTTATGATGCTGTTGTTGGGGACATGACCATAATAGAGGAAAGATTGCCGTATGTGGATTTTACAGTGCCATATGCAGAATCAGGATTGTCAATGATAGTTCCGATGAAGCCTGGAGAGTCAGCATGGATGTTTATGAAGCCATTTACCTTGGAATTGTGGCTGGTTACAGGTGCAATCTTGATTTACACAATGTTAGTTGTTTGGTATCTCGAGAGAGAACCGAACCCAGAGTTTCAGCTCAGCACAGCTCTTTGGTTTACCTTCTCCTCTTTGTTCTTCGCTCATAGAGCAGAAATGCACAGCAACTTAACTCGAGTGGTGATGGTCTCATGGCTCTTTCTTGTATTGATTGTCACCTCAAGCTACACAGCTAGTCTTTCATCAATGCTCACAGTTAAACAGTTGCGAGCAAATGTAACAGACATTCAGTGGCTGAAGAACAACAACAAGAAAATTGGTTGTGACGGCGATTCATTTGTTAGAGCGTTCCTAGAGAAAGTTGAAAAGTTTAAGCCAGAGAATATCATAAACATTACCGATGAATACAAATATGATGATGCATTCTCTAATAACAGCATAGCAGCTGCTTTTCTTGAGCTCCCATATGAAAAAGTATTCATCAGTAAATACTGCAAGAGATACACTGGCTTCACTCCTAGAACTAGATTTGGAGGATTGGGCTTTATGTTCCAGAAAGGCTCTCCTCTCGTGAAAGATGTATCGAAAGCTATATTGCATCTCTCAGAACATGCAGAGTTGAAAAGATTGGAAGAAAAGTGGTTAATTAGTTCACAGGATTGCTCCAACAACGTTACATCCTCGAACGATACGAATAGTTTGAATCTTGGAAGCTTATGGGTCCTATATGTCATGTCTGGTGCTACTTCTACTATTTGTGTGCTAATACAAACCATCAAGTGGCTAAAATCCAATCAGCCACATGAAGACTTGCCACCAGAAGAAGGCAATGGCACGCCAAGTGATGAAAGGGTGTGGAAAAAGGCGATTACATTTGCAAAGCAGATTTATAGCAAAAAGCACAATAATTCAAGCAAAGAACAAGATGTAATTGACTGTTCTTCGAGATCAGGTCATGTGAGCATCACTGATAGCCCTGAGCATTCACAGGAACTCGCTTCTATACAAAAAGACGTACATATTACACCATATAACATAGGAACATTAGAACCACATGGACTTCAAAATAATTGTCATATCAGACACTGTACAAACCAACTTTAA 2823 0.4042 MHYLSTVTQPLARIWLFFFLLIPFALIYGIRDETMNSENKVISIGVIIDGDSRIGKEQEVAMDIAAQSYNNTSKNYKLALYFKNSTKDTLKAIKIAEEMINVQKVQVIIGMQTWQEAAMVAEVGSKAQVPIISFAAPTITPPLMEVRWPFLVRLANTGTAYIKCIAEIVQAYSWKKVVVIYEDDGYGGDYGMLALLAEALQDVDSMIEHRLVLPPISSLQDPEELVSEEMLKLKQTQSRVFIVLQSSVEMAIHVFKEASKVGLVDKESVWMIPESITNLLDSVNKSAISYMEGALGIKTYYSERSREYKGFEAQFRRTFWSKNPEEDNRYPGFYALQAYDSINIVTQALNRMTSRNNRSPKTLLREILSCNFLGLSGHIQIESGQLIQKNLVLRIVNVAGKSYKELCFWTQQHGFTTIHHAGQGGNKVAGNTKCFRGVRWPGNLAHDPKGWNMPTEKNPLRIAVRSRTSFSRFVKVDYDQNGEPEYSGFSIEIFEQVQKVLGYNLPSRYYPINGTYNDLVQLVYNKTYDAVVGDMTIIEERLPYVDFTVPYAESGLSMIVPMKPGESAWMFMKPFTLELWLVTGAILIYTMLVVWYLEREPNPEFQLSTALWFTFSSLFFAHRAEMHSNLTRVVMVSWLFLVLIVTSSYTASLSSMLTVKQLRANVTDIQWLKNNNKKIGCDGDSFVRAFLEKVEKFKPENIINITDEYKYDDAFSNNSIAAAFLELPYEKVFISKYCKRYTGFTPRTRFGGLGFMFQKGSPLVKDVSKAILHLSEHAELKRLEEKWLISSQDCSNNVTSSNDTNSLNLGSLWVLYVMSGATSTICVLIQTIKWLKSNQPHEDLPPEEGNGTPSDERVWKKAITFAKQIYSKKHNNSSKEQDVIDCSSRSGHVSITDSPEHSQELASIQKDVHITPYNIGTLEPHGLQNNCHIRHCTNQL 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00519 940 FunFam Glutamate receptor 161 329 - -
Mepo6g00519 940 Pfam Receptor family ligand binding region 59 391 IPR001828 -
Mepo6g00519 940 Gene3D - 161 331 - -
Mepo6g00519 940 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 43 871 IPR015683 -
Mepo6g00519 940 Pfam Ligand-gated ion channel 789 820 IPR001320 GO:0015276|GO:0016020
Mepo6g00519 940 SUPERFAMILY Periplasmic binding protein-like I 38 450 IPR028082 -
Mepo6g00519 940 CDD PBP1_GABAb_receptor_plant 43 416 IPR044440 -
Mepo6g00519 940 Gene3D - 36 160 - -
Mepo6g00519 940 Gene3D - 569 700 - -
Mepo6g00519 940 Gene3D - 454 568 - -
Mepo6g00519 940 FunFam Glutamate receptor 455 568 - -
Mepo6g00519 940 Pfam Bacterial extracellular solute-binding proteins, family 3 483 788 IPR001638 -
Mepo6g00519 940 SUPERFAMILY Periplasmic binding protein-like II 438 789 - -
Mepo6g00519 940 Gene3D - 720 796 - -
Mepo6g00519 940 FunFam Glutamate receptor 568 700 - -
Mepo6g00519 940 PIRSF IGluLR_plant 10 918 IPR017103 -
Mepo6g00519 940 SMART GluR_14 459 790 IPR001320 GO:0015276|GO:0016020
Mepo6g00519 940 CDD GluR_Plant 458 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00519 Mepo-Chr6 5264099 5267722 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00519 14 835 Ion Channels AT2G29120 32.445 7.00e-143 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00519 - - gmx:100818619 1317.75