Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00518 ATGCATTACCTTTCAACCATTCCTCGAGCAGTTGCTAGAATTCGGCTATTATTTTTCTTACTCGTCCCTTTAGGTCTCATTTACGGTGTACAAGATGAAACTAAAAATTCAGACAACAAAGTTATATCCATTGGTGTGATCGTTGATGTTAACTTTCATATTGGGAAAGAACAAGAACTAGCCATGGAAATTGCAGCCCAAATTTACAACAACACTTCAAAGAACTACAAGTTGGCTCTCTATTTTCAGAATTTCACCAAAGATACCCTCAACACCATCAGAATTGCTGAAGAGATGATTAATGTGCAAAAGGTGCAAGTGATTATAGGAATGCACACATGGCCAGAAGCAGCTATAGTGGCAGAAATAGGAAGCAAAGCTCAAGTTCCTATCATATCCTTTGCAGGTCCTACCATACCCCCACCATTGATGAATGCTCGATGGCCTTTTCTGGTGAGACTAGCCAACAATGGTACGACATACATAAAATGCATTGCAGAAATAGTGCATGCTTATAGCTGGAAGAGAGTAGTAGTAATCTACGAAGATGATGGGTATGGTGGAGATTATGGGATGCTAACCCTGTTAGGAGAAGCCCTTCAAGATGTGGATTCAATGATTGAGCACCGCTTAATCCTTCCCTCGATTTCTTCTCTACGTGATCCAGGAGAGCTAATTAGTAAAGAGATGATTAAGTTAACCCAAACACAGTCTCGTGTGTTCATAGTGCTGCAATCAACATTAGAAATGGCAATTCATTTGTTCAAAGAAGCTTCAAAAGTTGGACTGGTGGATAAAGAGTCAGTTTGGATAATCTCAGATAGCATAACTAATTTGCTGGACTCTGTCAATAAGTCTGCTATTTCTTATATGGAAGGTGCTTTAGGAATTAAAACCTATTACTCAGAAAGAAGCAAGGAGTATCAAGAATTTGAGGCTCAGTTCCGGAGAACATTTTGGTTAAAGAATCCAGAGGAAGATAACCGCTATCCAGGATTTTATGCTCTACAAGCATATGATAGCATTAACACCGTAACTCAAGCTTTCAACAGAATGACCAGTAGGAACAATAGCAGCCCAAAAACTTTACTAAGCGAAATACAGTCTAGCAATTTCATTGGTTTAAGTGGCCATATTCAACTTGAAGCTGGGCAAGTCATGCAGAAGAATCTTATCCTAAGGATAGTTAATGTGGCTGGGAAGAGTTACAAGGAATTATGTTTTTGGACCGAACAGCATGGTTTCACTACAATCCACCATGCAGGACAAGGTGGAAATAAGGTTACTGGAAAAACAGAATGTTCAAGGGGTGTCCACTGGCCTGGGAATTTAGACCGCAATCCAAAGGGCTGGAACATGCCTACAGAAAAAAATCCATTGAAAATTGCAGTCAAAAGTACCTATTTTTCCAGGTTTGTCAAGGTTGAGTATGGCCAGAATGGAAAGCCTAATAAATATAGTGGACTCTGCATTGAAATTTTTGAGCAAGTACAAAAACGTTTGGGGTACGATCTGCCATATAGGTATTATCCCATCAATGGAACCTATAATGATATGGTTCAGCTTGTCTATAACAAGACTTACGACGCTTTTGTTGGGGACACGACCATAATAGAGGAAAGATTGAGGTATGTGGATTTTACATTGCCATATGTAGAATCAGGATTGTCGATGATAGTTCCATTGAAGTCTGAAGATTCAGCATGGATGTTTATGAAGCCATTTACCTGGGACTTGTGGCTGGCTACAGGTGCAATCTTGATTTACACAATGTTAGTTGTTTGGTATCTAGAGAGAGTACCCAACCCAGAGTTTCATGGAAACTGGAAGCTCCAGCTCAGCACAGCTCTTTGGTTTACCTTCTCTTCTCTCTTCTTTGCTCATAGGGAAAATATGCACAGCAGCTTAACTCGAGTGGTGATGGTCTCATGGCTCTTTCTTGTATTGATTCTCACCTCAAGCTACACAGCTAGTCTTTCTTCAATGCTCACATTTAAACAGCTGCGACCAGATGTCACAGACATTCAATGGCTGAAGGACAACGACAAGAAAGTTGGTTGTGACGGCGACTCATTTGTTAGGACGTTCTTAGAAAAAGTTGAAAAGTTCAAGCCAGAGAATATCATAAGCGTTTATGAATACAAGTATGATGAAGCATTCACTAATAACAGCATTGTAGCTGCTTTTCTTGAGATCCCGTATGAAAAAGTATTCATCGATGAATACTGCAAGAAATACATTGGCTCCACTCCCAGTATTAGATTTGGAGGATTGGGCTTTATGTTCCAGAAAGGCTCTCCTCTCGTGAAAGATGTATCGAAAGCTATATTACATCTCTCAGAAGATGCAGAGTTGAAGAGATTGGAAGAAAAGTGGTTACTTACCTCACAGGATTGCTCCAACAACGTGACATCCTCCAATGGTACGGATAGTTTGAATCTTCGAAGCTTACGGGCTCTATATGTCATCTCTGCCACCACTTCTACCATTTGTGTGCTAATATCAACCATCAAGTACCTAAAATTCAATCAGCCAGATGAAGACTTGCCACCAGAAGGCAATGGTACACCAACTGATGAAAGTGTGTGGAAAAAGGTTATTACATTTGCAAAGCAGATTTATGGCAAAATGCATAATAATTCAAGCAAGGTACAGGAAGTAACCGACCGTTCTTCGAGATCAGGTCATGCGAGTAAAGCTGATACCCCTGAGCAATCGCAGGAACTCGCTTCTCCGCCAAAAGAGGTACATACGACAACACATGACACAGGAACATAA 2778 0.4039 MHYLSTIPRAVARIRLLFFLLVPLGLIYGVQDETKNSDNKVISIGVIVDVNFHIGKEQELAMEIAAQIYNNTSKNYKLALYFQNFTKDTLNTIRIAEEMINVQKVQVIIGMHTWPEAAIVAEIGSKAQVPIISFAGPTIPPPLMNARWPFLVRLANNGTTYIKCIAEIVHAYSWKRVVVIYEDDGYGGDYGMLTLLGEALQDVDSMIEHRLILPSISSLRDPGELISKEMIKLTQTQSRVFIVLQSTLEMAIHLFKEASKVGLVDKESVWIISDSITNLLDSVNKSAISYMEGALGIKTYYSERSKEYQEFEAQFRRTFWLKNPEEDNRYPGFYALQAYDSINTVTQAFNRMTSRNNSSPKTLLSEIQSSNFIGLSGHIQLEAGQVMQKNLILRIVNVAGKSYKELCFWTEQHGFTTIHHAGQGGNKVTGKTECSRGVHWPGNLDRNPKGWNMPTEKNPLKIAVKSTYFSRFVKVEYGQNGKPNKYSGLCIEIFEQVQKRLGYDLPYRYYPINGTYNDMVQLVYNKTYDAFVGDTTIIEERLRYVDFTLPYVESGLSMIVPLKSEDSAWMFMKPFTWDLWLATGAILIYTMLVVWYLERVPNPEFHGNWKLQLSTALWFTFSSLFFAHRENMHSSLTRVVMVSWLFLVLILTSSYTASLSSMLTFKQLRPDVTDIQWLKDNDKKVGCDGDSFVRTFLEKVEKFKPENIISVYEYKYDEAFTNNSIVAAFLEIPYEKVFIDEYCKKYIGSTPSIRFGGLGFMFQKGSPLVKDVSKAILHLSEDAELKRLEEKWLLTSQDCSNNVTSSNGTDSLNLRSLRALYVISATTSTICVLISTIKYLKFNQPDEDLPPEGNGTPTDESVWKKVITFAKQIYGKMHNNSSKVQEVTDRSSRSGHASKADTPEQSQELASPPKEVHTTTHDTGT 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00518 925 MobiDBLite consensus disorder prediction 898 925 - -
Mepo6g00518 925 Gene3D - 464 567 - -
Mepo6g00518 925 MobiDBLite consensus disorder prediction 880 925 - -
Mepo6g00518 925 FunFam Glutamate receptor 568 698 - -
Mepo6g00518 925 SUPERFAMILY Periplasmic binding protein-like I 39 451 IPR028082 -
Mepo6g00518 925 CDD PBP1_GABAb_receptor_plant 43 416 IPR044440 -
Mepo6g00518 925 PIRSF IGluLR_plant 10 924 IPR017103 -
Mepo6g00518 925 Gene3D - 736 800 - -
Mepo6g00518 925 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 43 875 IPR015683 -
Mepo6g00518 925 SMART GluR_14 461 795 IPR001320 GO:0015276|GO:0016020
Mepo6g00518 925 Pfam Receptor family ligand binding region 59 390 IPR001828 -
Mepo6g00518 925 SUPERFAMILY Periplasmic binding protein-like II 440 794 - -
Mepo6g00518 925 Gene3D - 165 333 - -
Mepo6g00518 925 CDD GluR_Plant 458 793 - -
Mepo6g00518 925 FunFam Glutamate receptor 161 329 - -
Mepo6g00518 925 Pfam Ligand-gated ion channel 794 825 IPR001320 GO:0015276|GO:0016020
Mepo6g00518 925 Gene3D - 36 164 - -
Mepo6g00518 925 Gene3D - 568 704 - -
Mepo6g00518 925 Pfam Bacterial extracellular solute-binding proteins, family 3 482 793 IPR001638 -
Mepo6g00518 925 Gene3D - 343 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00518 Mepo-Chr6 5256742 5260834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00518 8 840 Ion Channels AT2G29120 31.792 1.22e-135 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00518 - - gmx:100818619 1276.54