Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00515 ATGGAAAATATTCACATTCACAATAGCAATGATCATCATGCAACTTCTGAAGGGTCTATTCTTGAGAATATATGGGCCAAAATTAGCAACAATGATGGAAGAACAAATGGAAATGAAGCAGAATGTTCTAACACATGGGAAGAATTGCCTAATCTTGGCGAAAGAGACGGTTCGATGGAAATACTTCAAAGGCTTCCTAGTTTAGGAAGATGGATATCAATGGGAGCAGAATTTTGGGAAGAGCTTTTAGATGATATTCTACCAATTACTGCGATAAGCAATAAAGAAGATTTTTCATGCAACAAAAAAATGGAAATTGAAAGTGTGAATAAATCAAAGGAAAAAGTAGAAGAAGATGGTGTGAGAAAGGAGAAAAAAAGAGTTGAAAAACATTATAGAGGAGTAAGGAGAAGGCCATGGGGTAAATATGCAGCTGAAATTAGAGATTCATCAAAGAAAGGTTCAAGAGTTTGGCTTGGTACATTTGATACAGCTGAACAAGCTGCTTTAGCTTATGATAAAGCTGCTTTGAGAATTAGAGGTTCAAAAGCATGTCTTAATTTCCCAATCGAGAGTGTTGCAAGTACAAATGCTTTAGGATGTGGTAAGAAAGGAATTGTTGATGTTACTAAGAGAGAAAGTTTATTGGATTCTAAGAAGAGAGGATTAAGGGATAGAGGAGAATTTGTTGATGTGATGAATATTGAAGAACCTGCAACCAAAAAGATGGCAGTGTTGGAATTGGAAGACATGTTAGAAAATGATGTTTTTGTATTTCAGGACCTAGGAATTGATTACTTGGACAGTTTGCTCTCATCTTTTTGA 825 0.3539 MENIHIHNSNDHHATSEGSILENIWAKISNNDGRTNGNEAECSNTWEELPNLGERDGSMEILQRLPSLGRWISMGAEFWEELLDDILPITAISNKEDFSCNKKMEIESVNKSKEKVEEDGVRKEKKRVEKHYRGVRRRPWGKYAAEIRDSSKKGSRVWLGTFDTAEQAALAYDKAALRIRGSKACLNFPIESVASTNALGCGKKGIVDVTKRESLLDSKKRGLRDRGEFVDVMNIEEPATKKMAVLELEDMLENDVFVFQDLGIDYLDSLLSSF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00515 274 Gene3D AP2/ERF domain 130 191 IPR036955 GO:0003700|GO:0006355
Mepo6g00515 274 PRINTS Ethylene responsive element binding protein signature 132 143 IPR001471 GO:0003700|GO:0006355
Mepo6g00515 274 PRINTS Ethylene responsive element binding protein signature 155 171 IPR001471 GO:0003700|GO:0006355
Mepo6g00515 274 ProSiteProfiles AP2/ERF domain profile. 131 189 IPR001471 GO:0003700|GO:0006355
Mepo6g00515 274 SUPERFAMILY DNA-binding domain 131 190 IPR016177 GO:0003677
Mepo6g00515 274 FunFam Ethylene-responsive transcription factor 2 130 191 - -
Mepo6g00515 274 SMART rav1_2 131 195 IPR001471 GO:0003700|GO:0006355
Mepo6g00515 274 PANTHER DNA-BINDING DOMAIN 111 208 IPR044808 GO:0003700|GO:0009873
Mepo6g00515 274 Pfam AP2 domain 131 181 IPR001471 GO:0003700|GO:0006355
Mepo6g00515 274 CDD AP2 130 190 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00515 Mepo-Chr6 5204061 5204885 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00515 17 230 AP2-EREBP Transcription Factor Family AT4G18450 40.724 1.25e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo6g00515 AP2 2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00515 - - mtr:11443318 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00515 6 5204061 5204885 Mepo6g00515 6 5204061 5204885 ECH