Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00514 ATGGTTTTATTTTCCCAATCCCAACCAGAATTACCCTTAAACGAGAATGACTCACAAGACATGGTTATATACCAAATCCTAAACGAGGCTAATGCTCTAACCAACACATATGTACCACATGGGAACCACCACCATCAAGCTTTGTTGAGTTGCTTAGAACCAACAAGGACTATAGCCAAGAAGCACTATAGAGGAGTAAGGCGTCGTCCTTGGGGGAAATACGCGGCGGAGATTCGCGACTCGGCTCGTCATGGAGCTAGAGTATGGCTTGGAACATTCCAAACAGCTGAAGAAGCTGCTATGGCTTATGATAGAGCTGCTTTCAAAATGAGAGGTTCAAAGGCTTTGCTTAATTTCCCAGCTGAAACTGTTGCTGCAGCTTCCATGCAAATGGAATTTTCTAGTTCTAAGCTTAGCTTGAATAATCATCATGATTCTGAATCAAGTGCTAGCAGCTAG 459 0.4336 MVLFSQSQPELPLNENDSQDMVIYQILNEANALTNTYVPHGNHHHQALLSCLEPTRTIAKKHYRGVRRRPWGKYAAEIRDSARHGARVWLGTFQTAEEAAMAYDRAAFKMRGSKALLNFPAETVAAASMQMEFSSSKLSLNNHHDSESSASS 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00514 152 PANTHER DNA-BINDING DOMAIN 50 135 IPR044808 GO:0003700|GO:0009873
Mepo6g00514 152 PRINTS Ethylene responsive element binding protein signature 86 102 IPR001471 GO:0003700|GO:0006355
Mepo6g00514 152 PRINTS Ethylene responsive element binding protein signature 63 74 IPR001471 GO:0003700|GO:0006355
Mepo6g00514 152 FunFam Ethylene-responsive transcription factor 2 61 122 - -
Mepo6g00514 152 CDD AP2 61 121 IPR001471 GO:0003700|GO:0006355
Mepo6g00514 152 SUPERFAMILY DNA-binding domain 62 121 IPR016177 GO:0003677
Mepo6g00514 152 Pfam AP2 domain 62 112 IPR001471 GO:0003700|GO:0006355
Mepo6g00514 152 Gene3D AP2/ERF domain 61 122 IPR036955 GO:0003700|GO:0006355
Mepo6g00514 152 SMART rav1_2 62 126 IPR001471 GO:0003700|GO:0006355
Mepo6g00514 152 ProSiteProfiles AP2/ERF domain profile. 62 120 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00514 Mepo-Chr6 5201572 5202573 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00514 4 120 AP2-EREBP Transcription Factor Family AT4G17500 50.000 2.77e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo6g00514 AP2 1.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00514 K13433 - gmx:100811533 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00514 6 5201572 5202573 Mepo6g00514 6 5201572 5202573 ECH