Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00512 ATGGCTTCATCAAATAGACACTGGCCAAGCATGTTTAAGTCTAAGCCCTGCAACAGTCATCACCAATGGCAGCATGACATCAACTCTTCTCTCATCTCTTCTGCTTGCCACAGAACCCCTTACTCCTCAGGTTGTGAGGAGAGAAGTCCTGAGCCAAAGCCAAGGTGGAATCCAAAACCAGAACAAATCCGCATACTTGAAGCTATCTTCAATTCTGGAATGGTGAATCCACCAAGAGAAGAAATAAGGAAGATTAGAGCACAGTTGCAAGAGTATGGTCAAGTTGGTGATGCTAATGTTTTCTATTGGTTCCAAAACCGCAAATCAAGAAGCAAGCATAAGCTTCGCCATCTTCAAAACCAAAACTCTAAGAATCAGAACCAAAATCAGCTGGATCAACCACCACAACAAAACCCTAGTTCACTTTCTCAAATTTCTGCTACTGTACCTTCATCTTCTTCATCTTCCTCTGAGAAATCTCCACCAAAAGAACTAATACCATCCAAAGTATTTTCCCTTGGTTTCCCTAACATCAATGATGTTGTGCCTAATTCTCCAACTGCTTCTGTGAACCAAAATCAAACATATTTTCAGACTCAAAATGTAACCACCCTTCTTCCACCACCACAAGTAACTGCACCACCTACTGAGACTTTCTTCTTCCCAGTGCAACATCATGGACAAGGAATAGTCCTTCCTAACAATGTTACATCACAAGGGTTTTGCTTCTCTGAACTTTCCAACATGGTTCCTGCTCAATCACATGGTCAGCAACACCATAACACTGGTAGTTGCACTACTAGTTTCCTGCTTAGTGAGATCATGAACAACCATGGTGTTAATTCCTCAAAGAAAGATCAAGAACAGGATAAGTCTGTGAAAATAATGCACCAAATTCCGCCACATCTGAACATCTGTTTGCCACCCGCCACAACTACTACTACTGTTTTACATCCTACTACTTCCTCCTCCATCACTGTTCCATCACCTATCATTTCTCAAGTGCAAGGCATTGGTGAACCAGGTGTTGCTGCAAAATCAGTGGTGTTCATCAATGATGTGGCCTTTGAGGTTGCATCTGGACCTTTTAATGTTCGTGCGGCATTTGGTGATGATGCTATTCTTGTACATCAAACTGGTCAGCCTGTGTTAACAAACCAGTATGGTGTTACTCTTCACTCACTCCAGCATGGTGCATTGTATTATTTGATGTAG 1215 0.4206 MASSNRHWPSMFKSKPCNSHHQWQHDINSSLISSACHRTPYSSGCEERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPREEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRHLQNQNSKNQNQNQLDQPPQQNPSSLSQISATVPSSSSSSSEKSPPKELIPSKVFSLGFPNINDVVPNSPTASVNQNQTYFQTQNVTTLLPPPQVTAPPTETFFFPVQHHGQGIVLPNNVTSQGFCFSELSNMVPAQSHGQQHHNTGSCTTSFLLSEIMNNHGVNSSKKDQEQDKSVKIMHQIPPHLNICLPPATTTTTVLHPTTSSSITVPSPIISQVQGIGEPGVAAKSVVFINDVAFEVASGPFNVRAAFGDDAILVHQTGQPVLTNQYGVTLHSLQHGALYYLM 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00512 404 ProSiteProfiles 'Homeobox' domain profile. 49 114 IPR001356 GO:0003677
Mepo6g00512 404 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 404 IPR044557 GO:0003700|GO:0050793
Mepo6g00512 404 SUPERFAMILY Homeodomain-like 49 117 IPR009057 -
Mepo6g00512 404 CDD homeodomain 52 114 IPR001356 GO:0003677
Mepo6g00512 404 MobiDBLite consensus disorder prediction 120 162 - -
Mepo6g00512 404 SMART HOX_1 51 118 IPR001356 GO:0003677
Mepo6g00512 404 MobiDBLite consensus disorder prediction 39 59 - -
Mepo6g00512 404 Gene3D - 53 119 - -
Mepo6g00512 404 MobiDBLite consensus disorder prediction 112 165 - -
Mepo6g00512 404 Pfam Homeodomain 53 113 IPR001356 GO:0003677
Mepo6g00512 404 FunFam WUSCHEL-related homeobox 11 53 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00512 Mepo-Chr6 5182868 5185152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00512 1 404 Wox Gene Family AT5G45980 35.817 5.80e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mepo6g00512 Homeodomain 5.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00512 - - aprc:113852083 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00512 6 5182868 5185152 Mepo6g00512 6 5182868 5185152 ECH