LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo6g00508	ATGGAAGAACAACATAAAGTGTTTCCTCTTCTGCTGCTGCTTCTTTTCCAAGTTTTTCTTGTTGCATCACAGACACAGACAGACAGTGGAGATTATACTGCTCTTTCTTCTCTCGTACAATCCTGGAACAACAAACCATCAAATTGGGTGGGGTTTGATCCTTGTGGCAGTGAGTGGGCTGGAATTAGTTGTGACGATTCAAGAATTACCGATTTGAAACTAGCTGGCTTGAGTTTGGAGGGTCAGCTATCTTCGGCAATCCAGTCCTTATCTGAACTTGAAACATTGGATCTTTCATTCAACACGGGCATGACAGGAACAATTCCACGTGAAATTGGGAATTTGAAAAACCTCAATTCCCTGGCATTGGCTGGTTGTGGTTTCTCTGGCCCTATTCCAGATTCAATAGGATCATTAAAGAAGCTGACCTTTTTAGCATTGAATTCAAATAATCTCACTGGAAATATTCCACACTCTCTTGGCAATCTATCCAACATTGATTGGTTAGATCTTGATCAAAACCAGCTGGAAGGGCCTATTCCTGTCTCTAATGATCAAGGACAATCTGGTCTTGACATGCTCCTTAAGGCACAGCACTTTCATTTGGGGAACAATAAACTCTCAGGTCCAATACCACAGAAACTTTTTAGCTCCAGCATGCATCTAAAACATGTGCTTTTCGACCACAATCAACTAACAGGCAGTATTCCTAGCACCCTAAGTAGCCTTAATAGCACAGTGGAAGTTGTGCGCTTTGACAAGAATCAATTAAGCGGGAGAGTGCCTTCCAGCTTGAACAATCTCAAAAAACTTACCGAGATCTCTTTATCTCACAATGAACTGAATGGCTCTCTGCCGGATTTTACTGGAATGAGTAGTCTCATCTCTGTGGATCTGAGCGACAATAAATTTGATTCTTCTCTTGTTCCTTCATGGGTTTTTAATTCTAGTCTGCCAAATCTGAACACAGTAATACTGAAGGACAACAAGCTTACTGGCACATTAGATCTCAGCAGTGGCTACAGAAGTAGTCTGCAACTCATTGATTTGCAGAATAATCTTATTACCAACCTCGTGATGGGAAACCAAAAGTTGAATTTTGACTTGAGACTGAGTCAAAACAGAATTTGTCTTGAAAATGGAGTTTCTGATGAGAGTTACTGCAAAGTTCCACAAACCATTCCCTCATATTCAACACCATCAAATGGTTGCTCACCTTCTTCATGCAGTAACGATCAGATCGCCAGCCCAAACTGTAAATGTGCATTTCCCTATAGTGGAAATCTAACATCCAGAGCTTCTAGTTTCTCAAATTTTGGTAACACAAGTTACTACAAGGAAATTGAACAGACTATGATGGATTTTTTTCGGAAACAAAACATTCCAGTAGATTCAGTTTCTCTTAGTAATCCTTTCAAGGATTCATCTACCGATAATTTTCAGTTGACTCTTAATGTGTTCCCATCTCAAACCGATCGTTTCAATACAACCGGGGTTTCAACTGTTGCTTTTGCGCTTAGCAACCAACTTTACAAGCCTCCAGAATATTTCACCCCCTACGCCTTCATTGGTGTTAACTATAAAAATTTAGGAGGAGAATCTAAAGGATCAAAGTCATCACATACTGGGGTTATAGTTGGTGCAGTAGTTGCTGTATTGGTCCTTCTTGTACTGGCAATCCTTATAGGGTTATACGCCATTCGCCAAAAAAGAGCAAGGTCTTCCGAGTCAAACCCCTTTGTAAACTGGGAACAGAACAATAATAGCGGAGCTGCTCCGCAGTTGAAAGGAGCGCGATGGTTTTCGTTTGATGAGATGAGGAAATACACCAACAATTTCGCAGAAGCCAACACTATTGGATCAGGCGGCTATGGACAGGTTTACCAAGGTGCTCTTCCCACTGGGGAATTGGTTGCAATCAAAAGGGCTGGAAAAGAATCTATGCAGGGTGCTGTTGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTCCATCATAAGAATCTTGTTAGTCTTGTTGGCTTCTGTTACGAGAAAGGTGAACAAATGCTGGTCTATGAGTACGTTCCAAATGGCACTTTATTGGATAGTCTTTCAGGAAAATCTGGGATATGGATGGATTGGATAAGGAGGCTCAAAGTTACATTGGGTGCCGCCAGGGGTCTGACCTATCTACATGAACTTGCTGACCCACCAATCATACACAGAGACATAAAATCAAGCAATATCCTACTTGATAATCACCTCATTGCAAAAGTTGCTGATTTCGGTCTCTCCAAACTTCTTGTTGATAGTGAAAGGGGCCATGTTACTACTCAAGTCAAAGGAACAATGGGATACTTGGATCCTGAATATTACATGACCCAGCAATTGACTGAAAAGAGTGATGTATATAGCTTTGGAGTGCTAATGCTGGAACTAGCAACATCAAGAAAGCCAATTGAGCAAGGAAAGTATATTGTACGAGAGGTTATGAGGGTAATGGATACATCAAAAGAGTTATACAACCTTCATTCCATTCTAGATCAAAGTCTACTCAAAGGGACAAGACCAAAAGGTTTAGAAAGGTATGTGGAGTTGGCATTGAGGTGTGTCAAAGAATATGCAGCTGAGAGACCTTCAATGGCCGAGGTTGCAAAAGAGATCGAGAGTATAATCGAGCTTGTTGGAGTGAACCCAAATTCTGAATCAGCTTCAACCACAGAAAATTACGAGGAAGCGGGTGCGGGGGATGGTAAACATCCTTATGCTAATGAGGAAGAATTTGAATATAGTGGAATCTTTCCAACAATAAGGGTAGAACCTCAATGA	2811	0.4105	MEEQHKVFPLLLLLLFQVFLVASQTQTDSGDYTALSSLVQSWNNKPSNWVGFDPCGSEWAGISCDDSRITDLKLAGLSLEGQLSSAIQSLSELETLDLSFNTGMTGTIPREIGNLKNLNSLALAGCGFSGPIPDSIGSLKKLTFLALNSNNLTGNIPHSLGNLSNIDWLDLDQNQLEGPIPVSNDQGQSGLDMLLKAQHFHLGNNKLSGPIPQKLFSSSMHLKHVLFDHNQLTGSIPSTLSSLNSTVEVVRFDKNQLSGRVPSSLNNLKKLTEISLSHNELNGSLPDFTGMSSLISVDLSDNKFDSSLVPSWVFNSSLPNLNTVILKDNKLTGTLDLSSGYRSSLQLIDLQNNLITNLVMGNQKLNFDLRLSQNRICLENGVSDESYCKVPQTIPSYSTPSNGCSPSSCSNDQIASPNCKCAFPYSGNLTSRASSFSNFGNTSYYKEIEQTMMDFFRKQNIPVDSVSLSNPFKDSSTDNFQLTLNVFPSQTDRFNTTGVSTVAFALSNQLYKPPEYFTPYAFIGVNYKNLGGESKGSKSSHTGVIVGAVVAVLVLLVLAILIGLYAIRQKRARSSESNPFVNWEQNNNSGAAPQLKGARWFSFDEMRKYTNNFAEANTIGSGGYGQVYQGALPTGELVAIKRAGKESMQGAVEFKTEIELLSRVHHKNLVSLVGFCYEKGEQMLVYEYVPNGTLLDSLSGKSGIWMDWIRRLKVTLGAARGLTYLHELADPPIIHRDIKSSNILLDNHLIAKVADFGLSKLLVDSERGHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELATSRKPIEQGKYIVREVMRVMDTSKELYNLHSILDQSLLKGTRPKGLERYVELALRCVKEYAAERPSMAEVAKEIESIIELVGVNPNSESASTTENYEEAGAGDGKHPYANEEEFEYSGIFPTIRVEPQ	936

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo6g00508	936	ProSitePatterns	Protein kinases ATP-binding region signature.	619	645	IPR017441	GO:0005524
	Mepo6g00508	936	SMART	serkin_6	613	886	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo6g00508	936	Gene3D	Phosphorylase Kinase; domain 1	583	688	-	-
	Mepo6g00508	936	Gene3D	Ribonuclease Inhibitor	26	187	IPR032675	-
	Mepo6g00508	936	CDD	STKc_IRAK	619	885	-	-
	Mepo6g00508	936	SUPERFAMILY	Protein kinase-like (PK-like)	599	891	IPR011009	-
	Mepo6g00508	936	Pfam	Protein kinase domain	615	880	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo6g00508	936	ProSiteProfiles	Protein kinase domain profile.	613	886	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo6g00508	936	FunFam	LRR receptor-like serine/threonine-protein kinase HSL2	689	898	-	-
	Mepo6g00508	936	FunFam	Leucine-rich repeat protein kinase family protein	580	688	-	-
	Mepo6g00508	936	FunFam	Leucine-rich repeat family protein	30	185	-	-
	Mepo6g00508	936	SUPERFAMILY	L domain-like	39	377	-	-
	Mepo6g00508	936	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	733	745	IPR008271	GO:0004672\|GO:0006468
	Mepo6g00508	936	PANTHER	RECEPTOR-LIKE PROTEIN 55	40	885	-	-
	Mepo6g00508	936	FunFam	Leucine-rich repeat protein kinase family protein	187	287	-	-
	Mepo6g00508	936	Gene3D	Transferase(Phosphotransferase) domain 1	689	904	-	-
	Mepo6g00508	936	Gene3D	Ribonuclease Inhibitor	188	403	IPR032675	-
	Mepo6g00508	936	MobiDBLite	consensus disorder prediction	894	922	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo6g00508	Mepo-Chr6	5148319	5155413	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo6g00508	10	936	Receptor kinase-like Gene Family	AT5G49760	51.309	0.0	902

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Mepo6g00508		Pkinase	1.9e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo6g00508	-		-	mtr:11440804	1731.84