Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00489 ATGGCGCAAGATATATCTTTTAAGAACGCCGCGGGTCCAGCAAATGGCCAAGCAGTGGCATTAAAATCTGATTCTGAATTTTCTGTATTCTATAGAGTTGGGATATATGGTTACCAGGATAGTCTATGCGCCAACCTGAATCGTCAGTTTTATAAAGAATGTACGATTAGTGGCACGGTAGACTTCATATTTGGTTATGCAAGTGCAATATTTCAAAATTGCCAAATTTTGGTAAAAAAAGGGGGCGTTGGTACAAAACACAATCACAGCTCAAGCAGGATTACTAGGAACAACAATAGCAACTGGCTTTGTATTTCAGTTTTGCAGCATATTAGCAGATTCCGACGTTTTACCTTGAATCAATTCAATATCAACATTCTTCGGTAG 387 0.385 MAQDISFKNAAGPANGQAVALKSDSEFSVFYRVGIYGYQDSLCANLNRQFYKECTISGTVDFIFGYASAIFQNCQILVKKGGVGTKHNHSSSRITRNNNSNWLCISVLQHISRFRRFTLNQFNINILR 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00489 128 ProSitePatterns Pectinesterase signature 2. 56 65 IPR033131 -
Mepo6g00489 128 Gene3D - 1 104 IPR012334 -
Mepo6g00489 128 PANTHER PECTINESTERASE 1 86 - -
Mepo6g00489 128 SUPERFAMILY Pectin lyase-like 2 99 IPR011050 -
Mepo6g00489 128 Pfam Pectinesterase 1 88 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00489 Mepo-Chr6 4996328 4996714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00489 1 81 Carbohydrate Esterase AT4G33220 61.728 2.04e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00489 K01051 - gmx:100798620 120.553